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Thursday, April 8, 2021

What Is Life?

From Wikipedia, the free encyclopedia

What Is Life? The Physical
Aspect of the Living Cell
Was ist Leben (1)-OG.JPG
Title pages of 1948 edition
AuthorErwin Schrödinger
CountryUnited Kingdom (UK)
LanguageEnglish
GenrePopular science
PublisherCambridge University Press
Publication date
1944
Media typePrint
Pages194 pp.
ISBN0-521-42708-8
OCLC24503223
574/.01 20
LC ClassQH331 .S357 1982

What Is Life? The Physical Aspect of the Living Cell is a 1944 science book written for the lay reader by physicist Erwin Schrödinger. The book was based on a course of public lectures delivered by Schrödinger in February 1943, under the auspices of the Dublin Institute for Advanced Studies where he was Director of Theoretical Physics, at Trinity College, Dublin. The lectures attracted an audience of about 400, who were warned "that the subject-matter was a difficult one and that the lectures could not be termed popular, even though the physicist’s most dreaded weapon, mathematical deduction, would hardly be utilized." Schrödinger's lecture focused on one important question: "how can the events in space and time which take place within the spatial boundary of a living organism be accounted for by physics and chemistry?"

In the book, Schrödinger introduced the idea of an "aperiodic crystal" that contained genetic information in its configuration of covalent chemical bonds. In the 1950s, this idea stimulated enthusiasm for discovering the genetic molecule. Although the existence of some form of hereditary information had been hypothesized since 1869, its role in reproduction and its helical shape were still unknown at the time of Schrödinger's lecture. In retrospect, Schrödinger's aperiodic crystal can be viewed as a well-reasoned theoretical prediction of what biologists should have been looking for during their search for genetic material.[citation needed] Both James D. Watson, and Francis Crick, who jointly proposed the double helix structure of DNA based on, amongst other theoretical insights, X-ray diffraction experiments by Rosalind Franklin, credited Schrödinger's book with presenting an early theoretical description of how the storage of genetic information would work, and each independently acknowledged the book as a source of inspiration for their initial researches.

Background

The book is based on lectures delivered under the auspices of the Dublin Institute for Advanced Studies, at Trinity College, Dublin, in February 1943 and published in 1944. At that time, although DNA was known to be a constituent of cell nuclei, the concept of a "heredity molecule" was strictly theoretical, with various candidates. One of the most successful branches of physics at this time was statistical physics, and quantum mechanics, a theory which is also very statistical in its nature. Schrödinger himself is one of the founding fathers of quantum mechanics.

Max Delbrück's thinking about the physical basis of life was an important influence on Schrödinger. However, long before the publication of What is Life?, geneticist and 1946 Nobel-prize winner H. J. Muller had in his 1922 article "Variation due to Change in the Individual Gene" already laid out all the basic properties of the "heredity molecule" (then not yet known to be DNA) that Schrödinger was to re-derive in 1944 "from first principles" in What is Life? (including the "aperiodicity" of the molecule), properties which Muller specified and refined additionally in his 1929 article "The Gene As The Basis of Life" and during the 1930s. Moreover, H. J. Muller himself wrote in a 1960 letter to a journalist regarding What Is Life? that whatever the book got right about the "hereditary molecule" had already been published before 1944 and that Schrödinger's were only the wrong speculations; Muller also named two famous geneticists (including Delbrück) who knew every relevant pre-1944 publication and had been in contact with Schrödinger before 1944. But DNA as the molecule of heredity became foremost only after Oswald Avery's bacterial-transformation experiments published in 1944; before those experiments, proteins were considered the most likely candidates. DNA was confirmed as the molecule in question by the Hershey–Chase experiment conducted in 1952.

Content

In chapter I, Schrödinger explains that most physical laws on a large scale are due to chaos on a small scale. He calls this principle "order-from-disorder." As an example he mentions diffusion, which can be modeled as a highly ordered process, but which is caused by random movement of atoms or molecules. If the number of atoms is reduced, the behaviour of a system becomes more and more random. He states that life greatly depends on order and that a naïve physicist may assume that the master code of a living organism has to consist of a large number of atoms.

In chapter II and III, he summarizes what was known at this time about the hereditary mechanism. Most importantly, he elaborates the important role mutations play in evolution. He concludes that the carrier of hereditary information has to be both small in size and permanent in time, contradicting the naïve physicist's expectation. This contradiction cannot be resolved by classical physics.

In chapter IV, Schrödinger presents molecules, which are indeed stable even if they consist of only a few atoms, as the solution. Even though molecules were known before, their stability could not be explained by classical physics, but is due to the discrete nature of quantum mechanics. Furthermore, mutations are directly linked to quantum leaps.

He continues to explain, in chapter V, that true solids, which are also permanent, are crystals. The stability of molecules and crystals is due to the same principles and a molecule might be called "the germ of a solid." On the other hand, an amorphous solid, without crystalline structure, should be regarded as a liquid with a very high viscosity. Schrödinger believes the heredity material to be a molecule, which unlike a crystal does not repeat itself. He calls this an aperiodic crystal. Its aperiodic nature allows it to encode an almost infinite number of possibilities with a small number of atoms. He finally compares this picture with the known facts and finds it in accordance with them.

In chapter VI Schrödinger states:

...living matter, while not eluding the "laws of physics" as established up to date, is likely to involve "other laws of physics" hitherto unknown, which however, once they have been revealed, will form just as integral a part of science as the former.

He knows that this statement is open to misconception and tries to clarify it. The main principle involved with "order-from-disorder" is the second law of thermodynamics, according to which entropy only increases in a closed system (such as the universe). Schrödinger explains that living matter evades the decay to thermodynamical equilibrium by homeostatically maintaining negative entropy in an open system.

In chapter VII, he maintains that "order-from-order" is not absolutely new to physics; in fact, it is even simpler and more plausible. But nature follows "order-from-disorder", with some exceptions as the movement of the celestial bodies and the behaviour of mechanical devices such as clocks. But even those are influenced by thermal and frictional forces. The degree to which a system functions mechanically or statistically depends on the temperature. If heated, a clock ceases to function, because it melts. Conversely, if the temperature approaches absolute zero, any system behaves more and more mechanically. Some systems approach this mechanical behaviour rather fast with room temperature already being practically equivalent to absolute zero.

Schrödinger concludes this chapter and the book with philosophical speculations on determinism, free will, and the mystery of human consciousness. He attempts to "see whether we cannot draw the correct non-contradictory conclusion from the following two premises: (1) My body functions as a pure mechanism according to Laws of Nature; and (2) Yet I know, by incontrovertible direct experience, that I am directing its motions, of which I foresee the effects, that may be fateful and all-important, in which case I feel and take full responsibility for them. The only possible inference from these two facts is, I think, that I – I in the widest meaning of the word, that is to say, every conscious mind that has ever said or felt 'I' – am the person, if any, who controls the 'motion of the atoms' according to the Laws of Nature". Schrödinger then states that this insight is not new and that Upanishads considered this insight of "ATHMAN = BRAHMAN" to "represent quintessence of deepest insights into the happenings of the world." Schrödinger rejects the idea that the source of consciousness should perish with the body because he finds the idea "distasteful". He also rejects the idea that there are multiple immortal souls that can exist without the body because he believes that consciousness is nevertheless highly dependent on the body. Schrödinger writes that, to reconcile the two premises,

The only possible alternative is simply to keep to the immediate experience that consciousness is a singular of which the plural is unknown; that there is only one thing and that what seems to be a plurality is merely a series of different aspects of this one thing…

Any intuitions that consciousness is plural, he says, are illusions. Schrödinger is sympathetic to the Hindu concept of Brahman, by which each individual's consciousness is only a manifestation of a unitary consciousness pervading the universe — which corresponds to the Hindu concept of God. Schrödinger concludes that "...'I' am the person, if any, who controls the 'motion of the atoms' according to the Laws of Nature." However, he also qualifies the conclusion as "necessarily subjective" in its "philosophical implications". In the final paragraph, he points out that what is meant by "I" is not the collection of experienced events but "namely the canvas upon which they are collected." If a hypnotist succeeds in blotting out all earlier reminiscences, he writes, there would be no loss of personal existence — "Nor will there ever be."

Schrödinger's "paradox"

In a world governed by the second law of thermodynamics, all isolated systems are expected to approach a state of maximum disorder. Since life approaches and maintains a highly ordered state, some argue that this seems to violate the aforementioned second law, implying that there is a paradox. However, since the biosphere is not an isolated system, there is no paradox. The increase of order inside an organism is more than paid for by an increase in disorder outside this organism by the loss of heat into the environment. By this mechanism, the second law is obeyed, and life maintains a highly ordered state, which it sustains by causing a net increase in disorder in the Universe. In order to increase the complexity on Earth—as life does—free energy is needed and in this case is provided by the Sun.

Africanized bee

From Wikipedia, the free encyclopedia

Africanized bee
Apis mellifera scutellata.jpg
Scientific classification
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Hybrid (see text)

The Africanized bee, also known as the Africanized honey bee and known colloquially as the "killer bee", is a hybrid of the western honey bee (Apis mellifera), produced originally by crossbreeding of the East African lowland honey bee (A. m. scutellata) with various European honey bee subspecies such as the Italian honey bee (A. m. ligustica) and the Iberian honey bee (A. m. iberiensis).

The East African lowland honey bee was first introduced to Brazil in 1956 in an effort to increase honey production, but 26 swarms escaped quarantine in 1957. Since then, the hybrid has spread throughout South America and arrived in North America in 1985. Hives were found in south Texas in the United States in 1990.

Africanized honey bees are typically much more defensive than other varieties of honey bees, and react to disturbances faster than European honey bees. They can chase a person a quarter of a mile (400 m); they have killed some 1,000 humans, with victims receiving 10 times more stings than from European honey bees. They have also killed horses and other animals.

History

There are 29 recognized subspecies of Apis mellifera based largely on geographic variations. All subspecies are cross-fertile. Geographic isolation led to numerous local adaptations. These adaptations include brood cycles synchronized with the bloom period of local flora, forming a winter cluster in colder climates, migratory swarming in Africa, enhanced (long-distance) foraging behavior in desert areas, and numerous other inherited traits.

The Africanized honey bees in the Western Hemisphere are descended from hives operated by biologist Warwick E. Kerr, who had interbred honey bees from Europe and southern Africa. Kerr was attempting to breed a strain of bees that would produce more honey in tropical conditions than the European strain of honey bee currently in use throughout North, Central and South America. The hives containing this particular African subspecies were housed at an apiary near Rio Claro, São Paulo, in the southeast of Brazil, and were noted to be especially defensive. These hives had been fitted with special excluder screens (called queen excluders) to prevent the larger queen bees and drones from getting out and mating with the local population of European bees. According to Kerr, in October 1957 a visiting beekeeper, noticing that the queen excluders were interfering with the worker bees' movement, removed them, resulting in the accidental release of 26 Tanganyikan swarms of A. m. scutellata. Following this accidental release, the Africanized honey bee swarms spread out and crossbred with local European honey bee colonies.

The descendants of these colonies have since spread throughout the Americas, moving through the Amazon Basin in the 1970s, crossing into Central America in 1982, and reaching Mexico in 1985. Because their movement through these regions was rapid and largely unassisted by humans, Africanized honey bees have earned the reputation of being a notorious invasive species. The prospect of killer bees arriving in the United States caused a media sensation in the late 1970s, inspired several horror movies, and sparked debate about the wisdom of humans altering entire ecosystems.

The first Africanized honey bees in the U.S. were discovered in 1985 at an oil field in the San Joaquin Valley of California. Bee experts theorized the colony had not traveled overland but instead "arrived hidden in a load of oil-drilling pipe shipped from South America." The first permanent colonies arrived in Texas from Mexico in 1990. In the Tucson region of Arizona, a study of trapped swarms in 1994 found that only 15 percent had been Africanized; this number had grown to 90 percent by 1997.

Characteristics

Though Africanized honey bees display certain behavioral traits that make them less than desirable for commercial beekeeping, excessive defensiveness and swarming foremost, they have now become the dominant type of honey bee for beekeeping in Central and South America due to their genetic dominance as well as ability to out-compete their European counterpart, with some beekeepers asserting that they are superior honey producers and pollinators.

Africanized honey bees, as opposed to other Western bee types:

  • Tend to swarm more frequently and go farther than other types of honey bees.
  • Are more likely to migrate as part of a seasonal response to lowered food supply.
  • Are more likely to "abscond"—the entire colony leaves the hive and relocates—in response to stress.
  • Have greater defensiveness when in a resting swarm, compared to other honey bee types.
  • Live more often in ground cavities than the European types.
  • Guard the hive aggressively, with a larger alarm zone around the hive.
  • Have a higher proportion of "guard" bees within the hive.
  • Deploy in greater numbers for defense and pursues perceived threats over much longer distances from the hive.
  • Cannot survive extended periods of forage deprivation, preventing introduction into areas with harsh winters or extremely dry late summers.
  • Live in dramatically higher population densities.

North American distribution

Map showing the spread of Africanized honey bees in the United States from 1990 to 2003

Africanized honey bees are considered an invasive species in the Americas. As of 2002, the Africanized honey bees had spread from Brazil south to northern Argentina and north to Central America, Trinidad (the West Indies), Mexico, Texas, Arizona, Nevada, New Mexico, Florida, and southern California. Their expansion stopped for a time at eastern Texas, possibly due to the large population of European honey bee hives in the area. However, discoveries of the Africanized honey bees in southern Louisiana show that they have gotten past this barrier, or have come as a swarm aboard a ship.

In June 2005, it was discovered that the bees had entered Texas and had spread into southwest Arkansas. On 11 September 2007, Commissioner Bob Odom of the Louisiana Department of Agriculture and Forestry said that Africanized honey bees had established themselves in the New Orleans area. In February 2009, Africanized honey bees were found in southern Utah. The bees had spread into eight counties in Utah, as far north as Grand and Emery Counties by May 2017.

In October 2010, a 73-year-old man was killed by a swarm of Africanized honey bees while clearing brush on his south Georgia property, as determined by Georgia's Department of Agriculture. In 2012, Tennessee state officials reported that a colony was found for the first time in a beekeeper's colony in Monroe County in the eastern part of the state. In June 2013, 62-year-old Larry Goodwin of Moody, Texas was killed by a swarm of Africanized honey bees.

In May 2014, Colorado State University confirmed that bees from a swarm which had aggressively attacked an orchardist near Palisade, in west-central Colorado, were from an Africanized honey bee hive. The hive was subsequently destroyed.

In tropical climates they effectively out-compete European honey bees and, at their peak rate of expansion, they spread north at almost two kilometers (about one mile) a day. There were discussions about slowing the spread by placing large numbers of docile European-strain hives in strategic locations, particularly at the Isthmus of Panama, but various national and international agricultural departments could not prevent the bees' expansion. Current knowledge of the genetics of these bees suggests that such a strategy, had it been tried, would not have been successful.

As the Africanized honey bee migrates further north, colonies continue to interbreed with European honey bees. In a study conducted in Arizona in 2004 it was observed that swarms of Africanized honey bees could take over weakened European honey bee hives by invading the hive, then killing the European queen and establishing their own queen. There are now relatively stable geographic zones in which either Africanized honey bees dominate, a mix of Africanized and European honey bees is present, or only non-Africanized honey bees are found, as in the southern portions of South America or northern North America.

An Africanized honey bee hive on Gila River Indian Community land

African honey bees abscond (abandon the hive and any food store to start over in a new location) more readily than European honeybees. This is not necessarily a severe loss in tropical climates where plants bloom all year, but in more temperate climates it can leave the colony with not enough stores to survive the winter. Thus Africanized honey bees are expected to be a hazard mostly in the southern states of the United States, reaching as far north as the Chesapeake Bay in the east. The cold-weather limits of the Africanized honey bee have driven some professional bee breeders from Southern California into the harsher wintering locales of the northern Sierra Nevada and southern Cascade Range. This is a more difficult area to prepare bees for early pollination placement in, such as is required for the production of almonds. The reduced available winter forage in northern California means that bees must be fed for early spring buildup.

The arrival of the Africanized honey bee in Central America is threatening the ancient art of keeping Melipona stingless bees in log gums, although they do not interbreed or directly compete with each other. The honey production from a single hive of Africanized honey bees can be 100 kg annually and far exceeds the much smaller 3–5 kg of the various Melipona stingless bee species. Thus economic pressures are forcing beekeepers to switch from the traditional stingless bees of their ancestors to the new reality of the Africanized honey bee. Whether this will lead to their extinction is unknown, but they are well adapted to exist in the wild, and there are a number of indigenous plants that the Africanized honey bees do not visit, so their fate remains to be seen.

Africanized honey bees gathering pollen at an Engelmann's prickly pear in the Mojave Desert

Foraging behavior

Africanized honey bees have a set of characteristics with respect to foraging behavior. Africanized honey bees begin foraging at young ages and harvest a greater quantity of pollen with respect to their European counterparts (Apis mellifera ligustica). This may be linked to the high reproductive rate of the Africanized honey bee which requires pollen to feed the greater number of larvae. Africanized honey bees are also sensitive to sucrose at lower concentrations. This adaptation causes foragers to harvest resources with low concentrations of sucrose that include water, pollen, and unconcentrated nectar. A study comparing A. m. scutellata and A. m. ligustica published by Fewell and Bertram in 2002 suggests that the differential evolution of this suite of behaviors is due to the different environmental pressures experienced by African and European subspecies.

Proboscis extension responses

Honey bee sensitivity to different concentrations of sucrose is determined by a reflex known as the proboscis extension response or PER. Different species of honey bees that employ different foraging behaviors will vary in the concentration of sucrose that elicits their proboscis extension response.

For example, European honey bees (Apis mellifera ligustica) forage at older ages and harvest less pollen and more concentrated nectar. The differences in resources emphasized during harvesting are a result of the European honey bee's sensitivity to sucrose at higher concentrations.

Evolution

The differences in a variety of behaviors between different species of honey bees are the result of a directional selection that acts upon several foraging behavior traits as a common entity. Selection in natural populations of honey bees show that positive selection of sensitivity to low concentrations of sucrose are linked to foraging at younger ages and collecting resources low in sucrose. Positive selection of sensitivity to high concentrations of sucrose were linked to foraging at older ages and collecting resources higher in sucrose. Additionally of interest, “change in one component of a suite of behaviors appear[s] to direct change in the entire suite.”

When resource density is low in Africanized honey bee habitats, it is necessary for the bees to harvest a greater variety of resources because they cannot afford to be selective. Honey bees that are genetically inclined towards resources high in sucrose like concentrated nectar will not be able to sustain themselves in harsher environments. The noted PER to low sucrose concentration in Africanized honey bees may be a result of selective pressure in times of scarcity when their survival depends on their attraction to low quality resources.

Morphology and genetics

The popular term "killer bee" has only limited scientific meaning today because there is no generally accepted fraction of genetic contribution used to establish a cut-off.

Morphological tests

Although the native East African lowland honey bees (Apis mellifera scutellata) are smaller and build smaller comb cells than the European honey bees, their hybrids are not smaller. Africanized honey bees have slightly shorter wings, which can only be recognized reliably by performing a statistical analysis on micro-measurements of a substantial sample.

An African honey bee extracts nectar from a flower as pollen grains stick to its body in Tanzania (this is a purebred African honey bee, not an 'Africanized' hybrid honey bee).

One of the problems with this test is that there are other subspecies, such as Apis mellifera iberiensis, which also have shortened wings. This trait is hypothesized to derive from ancient hybrid haplotypes thought to have links to evolutionary lineages from Africa. Some belong to Apis mellifera intermissa, but others have an indeterminate origin; the Egyptian honeybee (Apis mellifera lamarckii), present in small numbers in the southeastern U.S., has the same morphology.

DNA tests

Currently testing techniques have moved away from external measurements to DNA analysis, but this means the test can only be done by a sophisticated laboratory. Molecular diagnostics using the mitochondrial DNA (mtDNA) cytochrome b gene can differentiate A. m. scutellata from other A. mellifera lineages, though mtDNA only allows one to detect Africanized colonies that have Africanized queens and not colonies where a European queen has mated with Africanized drones. A test based on single nucleotide polymorphisms was created in 2015 to detect Africanized bees based on the proportion of African and European ancestry.

Western variants

The western honey bee is native to the continents of Europe, Asia, and Africa. As of the early 1600s, it was introduced to North America, with subsequent introductions of other European subspecies 200 years later. Since then, they have spread throughout the Americas. The 29 subspecies can be assigned to one of four major branches based on work by Ruttner and subsequently confirmed by analysis of mitochondrial DNA. African subspecies are assigned to branch A, northwestern European subspecies to branch M, southwestern European subspecies to branch C, and Mideast subspecies to branch O. The subspecies are grouped and listed. There are still regions with localized variations that may become identified subspecies in the near future, such as A. m. pomonella from the Tian Shan Mountains, which would be included in the Mideast subspecies branch.

The western honey bee is the third insect whose genome has been mapped, and is unusual in having very few transposons. According to the scientists who analyzed its genetic code, the western honey bee originated in Africa and spread to Eurasia in two ancient migrations. They have also discovered that the number of genes in the honey bee related to smell outnumber those for taste. The genome sequence revealed several groups of genes, particularly the genes related to circadian rhythms, were closer to vertebrates than other insects. Genes related to enzymes that control other genes were also vertebrate-like.

African variants

There are two lineages of the East African lowland subspecies (Apis mellifera scutellata) in the Americas: actual matrilineal descendants of the original escaped queens and a much smaller number that are Africanized through hybridization. The matrilineal descendants carry African mtDNA, but partially European nuclear DNA, while the honey bees that are Africanized through hybridization carry European mtDNA, and partially African nuclear DNA. The matrilineal descendants are in the vast majority. This is supported by DNA analyses performed on the bees as they spread northwards; those that were at the "vanguard" were over 90% African mtDNA, indicating an unbroken matriline, but after several years in residence in an area interbreeding with the local European strains, as in Brazil, the overall representation of African mtDNA drops to some degree. However, these latter hybrid lines (with European mtDNA) do not appear to propagate themselves well or persist. Population genetics analysis of Africanized honey bees in the United States, using a maternally inherited genetic marker, found 12 distinct mitotypes, and the amount of genetic variation observed supports the idea that there have been multiple introductions of AHB into the United States.

A newer publication shows the genetic admixture of the Africanized honey bees in Brazil. The small number of honey bees with African ancestry that were introduced to Brazil in 1956, which dispersed and hybridized with existing managed populations of European origin and quickly spread across much of the Americas, is an example of a massive biological invasion as earlier told in this article. Here, they analysed whole‐genome sequences of 32 Africanized honey bees sampled from throughout Brazil to study the effect of this process on genome diversity. By comparison with ancestral populations from Europe and Africa, they infer that these samples had 84% African ancestry, with the remainder from western European populations. However, this proportion varied across the genome and they identified signals of positive selection in regions with high European ancestry proportions. These observations are largely driven by one large gene‐rich 1.4 Mbp segment on chromosome 11 where European haplotypes are present at a significantly elevated frequency and likely confer an adaptive advantage in the Africanized honey bee population.

Consequences of selection

The chief difference between the European subspecies of honey bees kept by beekeepers and the African ones is attributable to both selective breeding and natural selection. By selecting only the most gentle, non-defensive subspecies, beekeepers have, over centuries, eliminated the more defensive ones and created a number of subspecies suitable for apiculture. The most common subspecies used in Europe and the United States today is the Italian honey bee (Apis mellifera ligustica), which has been used for over 1,000 years in some parts of the world and in the Americas since the arrival of the European colonists.

In Central and southern Africa there was formerly no tradition of beekeeping, and the hive was destroyed in order to harvest the honey, pollen and larvae. The bees adapted to the climate of Sub-Saharan Africa, including prolonged droughts. Having to defend themselves against aggressive insects such as ants and wasps, as well as voracious animals like the honey badger, African honey bees evolved as a subspecies group of highly defensive bees unsuitable by a number of metrics for domestic use.

As Africanized honey bees migrate into regions, hives with an old or absent queen can become hybridized by crossbreeding. The aggressive Africanized drones out-compete European drones for a newly developed queen of such a hive, ultimately resulting in hybridization of the existing colony. Requeening, a term for swapping out the old queen with a new, already fertilized one, can reduce hybridization in apiaries. As a prophylactic measure, the majority of beekeepers in North America tend to requeen their hives annually, maintaining strong colonies and avoiding hybridization.

Defensiveness

Africanized honey bees exhibit far greater defensiveness than European honey bees and are more likely to deal with a perceived threat by attacking in large swarms. These hybrids have been known to pursue a perceived threat for a distance of well over 500 meters (1,640 ft).

The venom of an Africanized honey bee is the same as that of a European honey bee, but since the former tends to sting in far greater numbers, deaths from them are naturally more numerous than from European honey bees. While allergies to the European honey bee may cause death, complications from Africanized honey bee stings are usually not caused from allergies to their venom. Humans stung many times by the Africanized honey bees can exhibit serious side effects such as inflammation of the skin, dizziness, headaches, weakness, edema, nausea, diarrhea, and vomiting. Some cases even progress to affecting different body systems by causing increased heart rates, respiratory distress, and even renal failure. Africanized honey bee sting cases can become very serious, but they remain relatively rare and are often limited to accidental discovery in highly populated areas.

Impact on humans

Fear factor

The Africanized honey bee is widely feared by the public, a reaction that has been amplified by sensationalist movies (such as The Swarm) and some of the media reports. Stings from Africanized honey bees kill on average one or two people per year.

As the Africanized honey bee spreads through Florida, a densely populated state, officials worry that public fear may force misguided efforts to combat them.

News reports of mass stinging attacks will promote concern and in some cases panic and anxiety, and cause citizens to demand responsible agencies and organizations to take action to help ensure their safety. We anticipate increased pressure from the public to ban beekeeping in urban and suburban areas. This action would be counter-productive. Beekeepers maintaining managed colonies of domestic European bees are our best defense against an area becoming saturated with AHB. These managed bees are filling an ecological niche that would soon be occupied by less desirable colonies if it were vacant.

— Florida African Bee Action Plan

Misconceptions

"Killer bee" is a term frequently used in media such as movies that portray aggressive behavior or actively seeking to attack humans. "Africanized honey bee" is considered a more descriptive term in part because their behavior is increased defensiveness compared to European honey bees that can exhibit similar defensive behaviors when disturbed.

The sting of the Africanized honey bee is no more potent than any other variety of honey bee, and although they are similar in appearance to European honey bees, they tend to be slightly smaller and darker in color. Although Africanized honey bees do not actively search for humans to attack, they are more dangerous because they are more easily provoked, quicker to attack in greater numbers, and then pursue the perceived threat farther, sometimes for up to a kilometer (approx. ​58 mile) or more.

While studies have shown that Africanized honey bees can infiltrate European honey bee colonies and then kill and replace their queen (thus usurping the hive), this is less common than other methods. Wild and managed colonies will sometimes be seen to fight over honey stores during the dearth (periods when plants are not flowering), but this behavior should not be confused with the aforementioned activity. The most common way that a European honey bee hive will become Africanized is through crossbreeding during a new queen's mating flight. Studies have consistently shown that Africanized drones are more numerous, stronger and faster than their European cousins and are therefore able to out-compete them during these mating flights. The results of mating between Africanized drones and European queens is almost always Africanized offspring.

Impact on apiculture

In areas of suitable temperate climate, the survival traits of Africanized honey bee colonies help them outperform European honey bee colonies. They also return later and basically work under conditions that often keep European honey bees hive-bound. This is the reason why they have gained a well-deserved reputation as superior honey producers, and those beekeepers who have learned to adapt their management techniques now seem to prefer them to their European counterparts. Studies show that in areas of Florida that contain Africanized honey bees, the honey production is higher than in areas in which they do not live. It is also becoming apparent that Africanized honey bees have another advantage over European honey bees in that they seem to show a higher resistance to several health issues, including parasites such as Varroa destructor, some fungal diseases like chalkbrood and even the mysterious colony collapse disorder which is currently plaguing beekeepers. So despite all its negative factors, it is possible that the Africanized honey bee might actually end up being a boon to apiculture.

Queen management

In areas where Africanized honey bees are well established, bought and pre-fertilized (i.e. mated) European queens can be used to maintain a hive's European genetics and behavior. However, this practice can be expensive, since these queens must be bought and shipped from breeder apiaries in areas completely free of Africanized honey bees, such as the northern U.S. states or Hawaii. As such, this is generally not practical for most commercial beekeepers outside the U.S., and it is one of the main reasons why Central and South American beekeepers have had to learn to manage and work with the existing Africanized honey bee. Any effort to crossbreed virgin European queens with Africanized drones will result in the offspring exhibiting Africanized traits; only 26 swarms escaped in 1957, and nearly 60 years there does not appear to be a noticeable lessening of the typical Africanized characteristics.

Gentleness

Not all Africanized honey bee hives display the typical hyper-defensive behavior, which may provide bee breeders a point to begin breeding a gentler stock (gAHBs). Work has been done in Brazil towards this end, but in order to maintain these traits, it is necessary to develop a queen breeding and mating facility in order to requeen colonies and to prevent reintroduction of unwanted genes or characteristics through unintended crossbreeding with feral colonies. In Puerto Rico, some bee colonies are already beginning to show more gentle behavior. This is believed to be because the more gentle bees contain genetic material that is more similar to the European honey bee, although they also contain Africanized honey bee material. This degree of aggressiveness is surprisingly almost unrelated to individual genetics - instead being almost entirely determined by the entire hive's proportion of aggression genetics. Also while bee incidents are much less common than they were during the first wave of Africanized honey bee colonization, this can be largely attributed to modified and improved bee management techniques. Prominent among these are locating bee-yards much further from human habitation, creating barriers to keep livestock at enough of a distance to prevent interaction, and education of the general public to teach them how to properly react when feral colonies are encountered and what resources to contact. The Africanized honey bee is considered the honey bee of choice for beekeeping in Brazil.

Health effects of pesticides

From Wikipedia, the free encyclopedia
 
Pesticide toxicity
Warning2Pesticides.jpg
A sign warning about potential pesticide exposure.
SpecialtyEmergency medicine, toxicology

Health effects of pesticides may be acute or delayed in those who are exposed. A 2007 systematic review found that "most studies on non-Hodgkin lymphoma and leukemia showed positive associations with pesticide exposure" and thus concluded that cosmetic use of pesticides should be decreased. Strong evidence also exists for other negative outcomes from pesticide exposure including neurological problems, birth defects, fetal death, and neurodevelopmental disorder.

According to The Stockholm Convention on Persistent Organic Pollutants (2001), 9 of the 12 most dangerous and persistent chemicals were pesticides, so many have now been withdrawn from use.

Acute effects

Acute health problems may occur in workers that handle pesticides, such as abdominal pain, dizziness, headaches, nausea, vomiting, as well as skin and eye problems. In China, an estimated half-million people are poisoned by pesticides each year, 500 of whom die. Pyrethrins, insecticides commonly used in common bug killers, can cause a potentially deadly condition if breathed in.

Long-term effects

Cancer

Many studies have examined the effects of pesticide exposure on the risk of cancer. Associations have been found with: leukemia, lymphoma, brain, kidney, breast, prostate, pancreas, liver, lung, and skin cancers. This increased risk occurs with both residential and occupational exposures. Increased rates of cancer have been found among farm workers who apply these chemicals. A mother's occupational exposure to pesticides during pregnancy is associated with an increases in her child's risk of leukemia, Wilms' tumor, and brain cancer. Exposure to insecticides within the home and herbicides outside is associated with blood cancers in children.

Neurological

Evidence links pesticide exposure to worsened neurological outcomes.

The United States Environmental Protection Agency finished a 10-year review of the organophosphate pesticides following the 1996 Food Quality Protection Act, but did little to account for developmental neurotoxic effects, drawing strong criticism from within the agency and from outside researchers. Comparable studies have not been done with newer pesticides that are replacing organophosphates.

Reproductive effects

Strong evidence links pesticide exposure to birth defects, fetal death and altered fetal growth. Agent Orange, a 50:50 mixture of 2,4,5-T and 2,4-D, has been associated with bad health and genetic effects in Malaya and Vietnam. It was also found that offspring that were at some point exposed to pesticides had a low birth weight and had developmental defects.

Fertility

A number of pesticides including dibromochlorophane and 2,4-D has been associated with impaired fertility in males. Pesticide exposure resulted in reduced fertility in males, genetic alterations in sperm, a reduced number of sperm, damage to germinal epithelium and altered hormone function.

Other

Some studies have found increased risks of dermatitis in those exposed.

Additionally, studies have indicated that pesticide exposure is associated with long-term respiratory problems. Summaries of peer-reviewed research have examined the link between pesticide exposure and neurologic outcomes and cancer, perhaps the two most significant things resulting in organophosphate-exposed workers.

According to researchers from the National Institutes of Health (NIH), licensed pesticide applicators who used chlorinated pesticides on more than 100 days in their lifetime were at greater risk of diabetes. One study found that associations between specific pesticides and incident diabetes ranged from a 20 percent to a 200 percent increase in risk. New cases of diabetes were reported by 3.4 percent of those in the lowest pesticide use category compared with 4.6 percent of those in the highest category. Risks were greater when users of specific pesticides were compared with applicators who never applied that chemical.

Route of exposure

People can be exposed to pesticides by a number of different routes including: occupation, in the home, at school and in their food.

There are concerns that pesticides used to control pests on food crops are dangerous to people who consume those foods. These concerns are one reason for the organic food movement. Many food crops, including fruits and vegetables, contain pesticide residues after being washed or peeled. Chemicals that are no longer used but that are resistant to breakdown for long periods may remain in soil and water and thus in food.

The United Nations Codex Alimentarius Commission has recommended international standards for maximum residue limits (MRLs), for individual pesticides in food.

In the EU, MRLs are set by DG-SANCO.

In the United States, levels of residues that remain on foods are limited to tolerance levels that are established by the U.S. Environmental Protection Agency and are considered safe. The EPA sets the tolerances based on the toxicity of the pesticide and its breakdown products, the amount and frequency of pesticide application, and how much of the pesticide (i.e., the residue) remains in or on food by the time it is marketed and prepared. Tolerance levels are obtained using scientific risk assessments that pesticide manufacturers are required to produce by conducting toxicological studies, exposure modeling and residue studies before a particular pesticide can be registered, however, the effects are tested for single pesticides, and there is little information on possible synergistic effects of exposure to multiple pesticide traces in the air, food and water.

Strawberries and tomatoes are the two crops with the most intensive use of soil fumigants. They are particularly vulnerable to several types of diseases, insects, mites, and parasitic worms. In 2003, in California alone, 3.7 million pounds (1,700 metric tons) of metham sodium were used on tomatoes. In recent years other farmers have demonstrated that it is possible to produce strawberries and tomatoes without the use of harmful chemicals and in a cost-effective way.

Exposure routes other than consuming food that contains residues, in particular pesticide drift, are potentially significant to the general public.

Some pesticides can remain in the environment for prolonged periods of time. For example, most people in the United States still have detectable levels of DDT in their bodies even though it was banned in the US in 1972.

Prevention

Pesticides exposure cannot be studied in placebo controlled trials as this would be unethical. A definitive cause effect relationship therefore cannot be established. Consistent evidence can and has been gathered through other study designs. The precautionary principle is thus frequently used in environmental law such that absolute proof is not required before efforts to decrease exposure to potential toxins are enacted.

The American Medical Association recommend limiting exposure to pesticides. They came to this conclusion due to the fact that surveillance systems currently in place are inadequate to determine problems related to exposure. The utility of applicator certification and public notification programs are also of unknown value in their ability to prevent adverse outcomes.

Epidemiology

The World Health Organization and the UN Environment Programme estimate that each year, 3 million workers in agriculture in the developing world experience severe poisoning from pesticides, about 18,000 of whom die. According to one study, as many as 25 million workers in developing countries may suffer mild pesticide poisoning yearly. Detectable levels of 50 different pesticides were found in the blood of a representative sample of the U.S. population.

Research conflicts of interest

Concerns regarding conflict of interests regarding the research base have been raised. After his death Richard Doll of the Imperial Cancer Research Fund in England was found to have undisclosed ties to industry funding.

Other animals

A number of pesticides including the neonicotinoids clothianidin, dinotefuran, imidacloprid are toxic to bees. Exposure to pesticides may be one of the contributory factors to colony collapse disorder. A study in North Carolina indicated that more than 30 percent of the quail tested were made sick by one aerial insecticide application. Once sick, wild birds may neglect their young, abandon their nests, and become more susceptible to predators or disease.

Quantum biology

From Wikipedia, the free encyclopedia

Quantum biology is the study of applications of quantum mechanics and theoretical chemistry to biological objects and problems. Many biological processes involve the conversion of energy into forms that are usable for chemical transformations, and are quantum mechanical in nature. Such processes involve chemical reactions, light absorption, formation of excited electronic states, transfer of excitation energy, and the transfer of electrons and protons (hydrogen ions) in chemical processes, such as photosynthesis, olfaction and cellular respiration.

Quantum biology may use computations to model biological interactions in light of quantum mechanical effects. Quantum biology is concerned with the influence of non-trivial quantum phenomena, which can be explained by reducing the biological process to fundamental physics, although these effects are difficult to study and can be speculative.

History

Quantum biology is an emerging field; most of the current research is theoretical and subject to questions that require further experimentation. Though the field has only recently received an influx of attention, it has been conceptualized by physicists throughout the 20th century. It has been suggested that quantum biology might play a critical role in the future of the medical world. Early pioneers of quantum physics saw applications of quantum mechanics in biological problems. Erwin Schrödinger's 1944 book What is Life? discussed applications of quantum mechanics in biology. Schrödinger introduced the idea of an "aperiodic crystal" that contained genetic information in its configuration of covalent chemical bonds. He further suggested that mutations are introduced by "quantum leaps". Other pioneers Niels Bohr, Pascual Jordan, and Max Delbruck argued that the quantum idea of complementarity was fundamental to the life sciences. In 1963, Per-Olov Löwdin published proton tunneling as another mechanism for DNA mutation. In his paper, he stated that there is a new field of study called "quantum biology".

Applications

Photosynthesis

Diagram of FMO complex. Light excites electrons in an antenna. The excitation then transfers through various proteins in the FMO complex to the reaction center to further photosynthesis.

Organisms that undergo photosynthesis absorb light energy through the process of electron excitation in antennae. These antennae vary among organisms. For example, bacteria use ring-like antennae, while plants and use chlorophyll pigments to absorb photons. Photosynthesis creates Frenkel excitons, which provide a separation of charge that cells convert into usable chemical energy. The energy collected in reaction sites must be transferred quickly before it is lost to fluorescence or thermal vibrational motion.

Various structures, such as the FMO complex in green sulfur bacteria, are responsible for transferring energy from antennae to a reaction site. FT electron spectroscopy studies of electron absorption and transfer show an efficiency of above 99%, which cannot be explained by classical mechanical models like the diffusion model. Instead, as early as 1938, scientists theorized that quantum coherence was the mechanism for excitation energy transfer.

Scientists have recently looked for experimental evidence of this proposed energy transfer mechanism. A study published in 2007 claimed the identification of electronic quantum coherence at −196 °C (77 K). Another theoretical study from 2010 provided evidence that quantum coherence lives as long as 300 femtoseconds at biologically relevant temperatures (4 °C or 277 K) . In that same year, experiments conducted on photosynthetic cryptophyte algae using two-dimensional photon echo spectroscopy yielded further confirmation for long-term quantum coherence. These studies suggest that, through evolution, nature has developed a way of protecting quantum coherence to enhance the efficiency of photosynthesis. However, critical follow-up studies question the interpretation of these results. Single molecule spectroscopy now shows the quantum characteristics of photosynthesis without the interference of static disorder, and some studies use this method to assign reported signatures of electronic quantum coherence to nuclear dynamics occurring in chromophores. A number of proposals emerged trying to explain unexpectedly long coherence. According to one proposal, if each site within the complex feels its own environmental noise, the electron will not remain in any local minimum due to both quantum coherence and thermal environment, but proceed to the reaction site via quantum walks. Another proposal is that the rate of quantum coherence and electron tunneling create an energy sink that moves the electron to the reaction site quickly. Other work suggested that geometric symmetries in the complex may favor efficient energy transfer to the reaction center, mirroring perfect state transfer in quantum networks. Furthermore, experiments with artificial dye molecules cast doubts on the interpretation that quantum effects last any longer than one hundred femtoseconds.

In 2017, the first control experiment with the original FMO protein under ambient conditions confirmed that electronic quantum effects are washed out within 60 femtoseconds, while the overall exciton transfer takes a time on the order of a few picoseconds. In 2020 a review based on a wide collection of control experiments and theory concluded that the proposed quantum effects as long lived electronic coherences in the FMO system does not hold. Instead, research investigating transport dynamics suggests that interactions between electronic and vibrational modes of excitation in FMO complexes require a semi-classical, semi-quantum explanation for the transfer of exciton energy. In other words, while quantum coherence dominates in the short-term, a classical description is most accurate to describe long-term behavior of the excitons.

Another process in photosynthesis that has almost 100% efficiency is charge transfer, again suggesting that quantum mechanical phenomena are at play. In 1966, a study on the photosynthetic bacteria Chromatium found that at temperatures below 100 K, cytochrome oxidation is temperature-independent, slow (on the order of milliseconds), and very low in activation energy. The authors, Don DeVault and Britton Chase, postulated that these characteristics of electron transfer are indicative of quantum tunneling, whereby electrons penetrate a potential barrier despite possessing less energy than is classically necessary.

DNA mutation

Deoxyribonucleic acid, DNA, acts as the instructions for making proteins throughout the body. It consists of 4 nucleotides guanine, thymine, cytosine, and adenine. The order of these nucleotides gives the “recipe” for the different proteins.

Whenever a cell reproduces, it must copy these strands of DNA. However, sometimes throughout the process of copying the strand of DNA a mutation, or an error in the DNA code, can occur. A theory for the reasoning behind DNA mutation is explained in the Lowdin DNA mutation model. In this model, a nucleotide may change its form through a process of quantum tunneling. Because of this, the changed nucleotide will lose its ability to pair with its original base pair and consequently changing the structure and order of the DNA strand.

Exposure to ultraviolet lights and other types of radiation can cause DNA mutation and damage. The radiations also can modify the bonds along the DNA strand in the pyrimidines and cause them to bond with themselves creating a dimer.

In many prokaryotes and plants, these bonds are repaired to their original form by a DNA repair enzyme photolyase. As its prefix implies, photolyase is reliant on light in order to repair the strand. Photolyase works with its cofactor FADH, flavin adenine dinucleotide, while repairing the DNA. Photolyase is excited by visible light and transfers an electron to the cofactor FADH-. FADH- now in the possession of an extra electron gives the electron to the dimer to break the bond and repair the DNA. This transfer of the electron is done through the tunneling of the electron from the FADH to the dimer. Although the range of the tunneling is much larger than feasible in a vacuum, the tunneling in this scenario is said to be “superexchange-mediated tunneling,” and is possible due to the protein's ability to boost the tunneling rates of the electron.

Vibration theory of olfaction

Olfaction, the sense of smell, can be broken down into two parts; the reception and detection of a chemical, and how that detection is sent to and processed by the brain. This process of detecting an odorant is still under question. One theory named the “shape theory of olfaction” suggests that certain olfactory receptors are triggered by certain shapes of chemicals and those receptors send a specific message to the brain. Another theory (based on quantum phenomena) suggests that the olfactory receptors detect the vibration of the molecules that reach them and the “smell” is due to different vibrational frequencies, this theory is aptly called the “vibration theory of olfaction.”

The vibration theory of olfaction, created in 1938 by Malcolm Dyson but reinvigorated by Luca Turin in 1996, proposes that the mechanism for the sense of smell is due to G-protein receptors that detect molecular vibrations due to inelastic electron tunneling, tunneling where the electron loses energy, across molecules. In this process a molecule would fill a binding site with a G-protein receptor. After the binding of the chemical to the receptor, the chemical would then act as a bridge allowing for the electron to be transferred through the protein. As the electron transfers through and that usually would be a barrier for the electrons and would lose its energy due to the vibration of the molecule recently bound to the receptor, resulting in the ability to smell the molecule.

While the vibration theory has some experimental proof of concept, there have been multiple controversial results in experiments. In some experiments, animals are able to distinguish smells between molecules of different frequencies and same structure, while other experiments show that people are unaware of distinguishing smells due to distinct molecular frequencies. However, it has not been disproven, and has even been shown to be an effect in olfaction of animals other than humans such as flies, bees, and fish.

Vision

Vision relies on quantized energy in order to convert light signals to an action potential in a process called phototransduction. In phototransduction, a photon interacts with a chromophore in a light receptor. The chromophore absorbs the photon and undergoes photoisomerization. This change in structure induces a change in the structure of the photo receptor and resulting signal transduction pathways lead to a visual signal. However, the photoisomerization reaction occurs at a rapid rate, in under 200 femtoseconds, with high yield. Models suggest the use of quantum effects in shaping the ground state and excited state potentials in order to achieve this efficiency.

Quantum vision implications

Experiments have shown that the sensors in the retina of human eye is sensitive enough to detect a single photon. Single photon detection could lead to multiple different technologies. One area of development is in quantum communication and cryptography. The idea is to use a biometric system to measure the eye using only a small number of points across the retina with random flashes of photons that “read” the retina and identify the individual. This biometric system would only allow a certain individual with a specific retinal map to decode the message. This message can not be decoded by anyone else unless the eavesdropper were to guess the proper map or could read the retina of the intended recipient of the message.

Enzymatic activity (quantum biochemistry)

Enzymes may use quantum tunneling to transfer electrons long distances. It is possible that protein quaternary architecture may have evolved to enable sustained quantum entanglement and coherence. More specifically, they can increase the percentage of the reaction that occurs through hydrogen tunneling. Tunneling refers to the ability of a small mass particle to travel through energy barriers. This ability is due to the principle of complementarity, which hold that certain objects have pairs of properties that cannot be measured separately without changing the outcome of measurement. Electrons have both wave and particle properties, so they can pass through physical barriers as a wave without violating the laws of physics. Studies show that long distance electron transfers between redox centers through quantum tunneling plays important roles in enzymatic activity of photosynthesis and cellular respiration. For example, studies show that long range electron tunneling on the order of 15–30 Å plays a role in redox reactions in enzymes of cellular respiration. Without quantum tunneling, organisms would not be able to convert energy quickly enough to sustain growth. Even though there are such large separations between redox sites within enzymes, electrons successfully transfer in a generally temperature independent (aside from extreme conditions) and distance dependent manner. This suggests the ability of electrons to tunnel in physiological conditions. Further research is needed to determine whether this specific tunneling is also coherent.

Magnetoreception

Magnetoreception refers to the ability of animals to navigate using the inclination of the magnetic field of the earth. A possible explanation for magnetoreception is the entangled radical pair mechanism. The radical-pair mechanism is well-established in spin chemistry, and was speculated to apply to magnetoreception in 1978 by Schulten et al.. The ratio between singlet and triplet pairs is changed by the interaction of entangled electron pairs with the magnetic field of the earth. In 2000, cryptochrome was proposed as the "magnetic molecule" that could harbor magnetically sensitive radical-pairs. Cryptochrome, a flavoprotein found in the eyes of European robins and other animal species, is the only protein known to form photoinduced radical-pairs in animals. When it interacts with light particles, cryptochrome goes through a redox reaction, which yields radical pairs both during the photo-reduction and the oxidation. The function of cryptochrome is diverse across species, however, the photoinduction of radical-pairs occurs by exposure to blue light, which excites an electron in a chromophore. Magnetoreception is also possible in the dark, so the mechanism must rely more on the radical pairs generated during light-independent oxidation.

Experiments in the lab support the basic theory that radical-pair electrons can be significantly influenced by very weak magnetic fields, i.e. merely the direction of weak magnetic fields can affect radical-pair's reactivity and therefore can "catalyze" the formation of chemical products. Whether this mechanism applies to magnetoreception and/or quantum biology, that is, whether earth's magnetic field "catalyzes" the formation of biochemical products by the aid of radical-pairs, is undetermined for two reasons. The first is that radical-pairs may need not be entangled, the key quantum feature of the radical-pair mechanism, to play a part in these processes. There are entangled and non-entangled radical-pairs. However, researchers found evidence for the radical-pair mechanism of magnetoreception when European robins, cockroaches, and garden warblers, could no longer navigate when exposed to a radio frequency that obstructs magnetic fields and radical-pair chemistry. To empirically suggest the involvement of entanglement, an experiment would need to be devised that could disturb entangled radical-pairs without disturbing other radical-pairs, or vice versa, which would first need to be demonstrated in a laboratory setting before being applied to in vivo radical-pairs.

Other biological applications

Other examples of quantum phenomena in biological systems include the conversion of chemical energy into motion and brownian motors in many cellular processes.

Late Devonian extinction

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