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Sunday, May 9, 2021

Heme

From Wikipedia, the free encyclopedia
 
Binding of oxygen to a heme prosthetic group.

Heme, or haem (spelling differences) is a substance precursive to hemoglobin, which is necessary to bind oxygen in the bloodstream. Heme is biosynthesized in both the bone marrow and the liver.

In microbiological terms, heme is coordination complex "consisting of an iron ion coordinated to a porphyrin acting as a tetradentate ligand, and to one or two axial ligands." The definition is loose, and many depictions omit the axial ligands. Among the metalloporphyrins deployed by metalloproteins as prosthetic groups, heme is one of the most widely used and defines a family of proteins known as hemoproteins. Hemes are most commonly recognized as components of hemoglobin, the red pigment in blood, but are also found in a number of other biologically important hemoproteins such as myoglobin, cytochromes, catalases, heme peroxidase, and endothelial nitric oxide synthase.

The word haem is derived from Greek αἷμα haima meaning "blood".

Space-filling model of the Fe-protoporphyrin IX subunit of heme B. Axial ligands omitted. Color scheme: grey=iron, blue=nitrogen, black=carbon, white=hydrogen, red=oxygen

Function

The heme group of succinate dehydrogenase bound to histidine, an electron carrier in the mitochondrial electron transfer chain. The large semi-transparent sphere indicates the location of the iron ion. From PDB: 1YQ3​.

Hemoproteins have diverse biological functions including the transportation of diatomic gases, chemical catalysis, diatomic gas detection, and electron transfer. The heme iron serves as a source or sink of electrons during electron transfer or redox chemistry. In peroxidase reactions, the porphyrin molecule also serves as an electron source, being able to delocalize radical electrons in the conjugated ring. In the transportation or detection of diatomic gases, the gas binds to the heme iron. During the detection of diatomic gases, the binding of the gas ligand to the heme iron induces conformational changes in the surrounding protein. In general, diatomic gases only bind to the reduced heme, as ferrous Fe(II) while most peroxidases cycle between Fe(III) and Fe(IV) and hemeproteins involved in mitochondrial redox, oxidation-reduction, cycle between Fe(II) and Fe(III).

It has been speculated that the original evolutionary function of hemoproteins was electron transfer in primitive sulfur-based photosynthesis pathways in ancestral cyanobacteria-like organisms before the appearance of molecular oxygen.

Hemoproteins achieve their remarkable functional diversity by modifying the environment of the heme macrocycle within the protein matrix. For example, the ability of hemoglobin to effectively deliver oxygen to tissues is due to specific amino acid residues located near the heme molecule. Hemoglobin reversibly binds to oxygen in the lungs when the pH is high, and the carbon dioxide concentration is low. When the situation is reversed (low pH and high carbon dioxide concentrations), hemoglobin will release oxygen into the tissues. This phenomenon, which states that hemoglobin's oxygen binding affinity is inversely proportional to both acidity and concentration of carbon dioxide, is known as the Bohr effect. The molecular mechanism behind this effect is the steric organization of the globin chain; a histidine residue, located adjacent to the heme group, becomes positively charged under acidic conditions (which are caused by dissolved CO2 in working muscles, etc.), releasing oxygen from the heme group.

Types

Major hemes

There are several biologically important kinds of heme:


Heme A Heme B Heme C Heme O
PubChem number 7888115 444098 444125 6323367
Chemical formula C49H56O6N4Fe C34H32O4N4Fe C34H36O4N4S2Fe C49H58O5N4Fe
Functional group at C3 Porphyrine General Formula V.1.svg –CH(OH)CH2Far –CH=CH2 –CH(cystein-S-yl)CH3 –CH(OH)CH2Far
Functional group at C8 –CH=CH2 –CH=CH2 –CH(cystein-S-yl)CH3 –CH=CH2
Functional group at C18 –CH=O –CH3 –CH3 –CH3
Structure of Fe-porphyrin subunit of heme B.
 
Structure of Fe-porphyrin subunit of heme A. Heme A is synthesized from heme B. In two sequential reactions a 17-hydroxyethylfarnesyl moiety is added at the 2-position and an aldehyde is added at the 8-position.

The most common type is heme B; other important types include heme A and heme C. Isolated hemes are commonly designated by capital letters while hemes bound to proteins are designated by lower case letters. Cytochrome a refers to the heme A in specific combination with membrane protein forming a portion of cytochrome c oxidase.

Other hemes

The following carbon numbering system of porphyrins is an older numbering used by biochemists and not the 1–24 numbering system recommended by IUPAC which is shown in the table above.
  • Heme l is the derivative of heme B which is covalently attached to the protein of lactoperoxidase, eosinophil peroxidase, and thyroid peroxidase. The addition of peroxide with the glutamyl-375 and aspartyl-225 of lactoperoxidase forms ester bonds between these amino acid residues and the heme 1- and 5-methyl groups, respectively. Similar ester bonds with these two methyl groups are thought to form in eosinophil and thyroid peroxidases. Heme l is one important characteristic of animal peroxidases; plant peroxidases incorporate heme B. Lactoperoxidase and eosinophil peroxidase are protective enzymes responsible for the destruction of invading bacteria and virus. Thyroid peroxidase is the enzyme catalyzing the biosynthesis of the important thyroid hormones. Because lactoperoxidase destroys invading organisms in the lungs and excrement, it is thought to be an important protective enzyme.
  • Heme m is the derivative of heme B covalently bound at the active site of myeloperoxidase. Heme m contains the two ester bonds at the heme 1- and 5-methyl groups also present in heme l of other mammalian peroxidases, such as lactoperoxidase and eosinophil peroxidase. In addition, a unique sulfonamide ion linkage between the sulfur of a methionyl amino-acid residue and the heme 2-vinyl group is formed, giving this enzyme the unique capability of easily oxidizing chloride and bromide ions to hypochlorite and hypobromite. Myeloperoxidase is present in mammalian neutrophils and is responsible for the destruction of invading bacteria and viral agents. It perhaps synthesizes hypobromite by "mistake". Both hypochlorite and hypobromite are very reactive species responsible for the production of halogenated nucleosides, which are mutagenic compounds.
  • Heme D is another derivative of heme B, but in which the propionic acid side chain at the carbon of position 6, which is also hydroxylated, forms a γ-spirolactone. Ring III is also hydroxylated at position 5, in a conformation trans to the new lactone group. Heme D is the site for oxygen reduction to water of many types of bacteria at low oxygen tension.
  • Heme S is related to heme B by having a formal group at position 2 in place of the 2-vinyl group. Heme S is found in the hemoglobin of a few species of marine worms. The correct structures of heme B and heme S were first elucidated by German chemist Hans Fischer.

The names of cytochromes typically (but not always) reflect the kinds of hemes they contain: cytochrome a contains heme A, cytochrome c contains heme C, etc. This convention may have been first introduced with the publication of the structure of heme A.

Use of capital letters to designate the type of heme

The practice of designating hemes with upper case letters was formalized in a footnote in a paper by Puustinen and Wikstrom which explains under which conditions a capital letter should be used: "we prefer the use of capital letters to describe the heme structure as isolated. Lowercase letters may then be freely used for cytochromes and enzymes, as well as to describe individual protein-bound heme groups (for example, cytochrome bc, and aa3 complexes, cytochrome b5, heme c1 of the bc1 complex, heme a3 of the aa3 complex, etc)." In other words, the chemical compound would be designated with a capital letter, but specific instances in structures with lowercase. Thus cytochrome oxidase, which has two A hemes (heme a and heme a3) in its structure, contains two moles of heme A per mole protein. Cytochrome bc1, with hemes bH, bL, and c1, contains heme B and heme C in a 2:1 ratio. The practice seems to have originated in a paper by Caughey and York in which the product of a new isolation procedure for the heme of cytochrome aa3 was designated heme A to differentiate it from previous preparations: "Our product is not identical in all respects with the heme a obtained in solution by other workers by the reduction of the hemin a as isolated previously (2). For this reason, we shall designate our product heme A until the apparent differences can be rationalized.". In a later paper, Caughey's group uses capital letters for isolated heme B and C as well as A.

Synthesis

Heme synthesis in the cytoplasm and mitochondrion

The enzymatic process that produces heme is properly called porphyrin synthesis, as all the intermediates are tetrapyrroles that are chemically classified as porphyrins. The process is highly conserved across biology. In humans, this pathway serves almost exclusively to form heme. In bacteria, it also produces more complex substances such as cofactor F430 and cobalamin (vitamin B12).

The pathway is initiated by the synthesis of δ-aminolevulinic acid (dALA or δALA) from the amino acid glycine and succinyl-CoA from the citric acid cycle (Krebs cycle). The rate-limiting enzyme responsible for this reaction, ALA synthase, is negatively regulated by glucose and heme concentration. Mechanism of inhibition of ALAs by heme or hemin is by decreasing stability of mRNA synthesis and by decreasing the intake of mRNA in the mitochondria. This mechanism is of therapeutic importance: infusion of heme arginate or hematin and glucose can abort attacks of acute intermittent porphyria in patients with an inborn error of metabolism of this process, by reducing transcription of ALA synthase.

The organs mainly involved in heme synthesis are the liver (in which the rate of synthesis is highly variable, depending on the systemic heme pool) and the bone marrow (in which rate of synthesis of Heme is relatively constant and depends on the production of globin chain), although every cell requires heme to function properly. However, due to its toxic properties, proteins such as Hemopexin (Hx) are required to help maintain physiological stores of iron in order for them to be used in synthesis. Heme is seen as an intermediate molecule in catabolism of hemoglobin in the process of bilirubin metabolism. Defects in various enzymes in synthesis of heme can lead to group of disorder called porphyrias, these include acute intermittent porphyria, congenital erythropoetic porphyria, porphyria cutanea tarda, hereditary coproporphyria, variegate porphyria, erythropoietic protoporphyria.

Synthesis for food

Impossible Foods, producers of plant-based meat substitute, use an accelerated heme synthesis process involving soybean root leghemoglobin and yeast, adding the resulting heme to items such as meatless (vegan) Impossible burger patties. The DNA for leghemoglobin production was extracted from the soybean root nodules and expressed in yeast cells to overproduce heme for use in the meatless burgers. This process claims to create a meaty flavor in the resulting products.

Degradation

Heme breakdown

Degradation begins inside macrophages of the spleen, which remove old and damaged erythrocytes from the circulation. In the first step, heme is converted to biliverdin by the enzyme heme oxygenase (HO). NADPH is used as the reducing agent, molecular oxygen enters the reaction, carbon monoxide (CO) is produced and the iron is released from the molecule as the ferrous ion (Fe2+). CO acts as a cellular messenger and functions in vasodilation.

In addition, heme degradation appears to be an evolutionarily-conserved response to oxidative stress. Briefly, when cells are exposed to free radicals, there is a rapid induction of the expression of the stress-responsive heme oxygenase-1 (HMOX1) isoenzyme that catabolizes heme (see below). The reason why cells must increase exponentially their capability to degrade heme in response to oxidative stress remains unclear but this appears to be part of a cytoprotective response that avoids the deleterious effects of free heme. When large amounts of free heme accumulates, the heme detoxification/degradation systems get overwhelmed, enabling heme to exert its damaging effects.

heme heme oxygenase-1 biliverdin + Fe2+
Heme b.svg   Biliverdin3.svg
H+ + NADPH + O2 NADP+ + CO
Biochem reaction arrow forward YYNN horiz med.svg


 
 

In the second reaction, biliverdin is converted to bilirubin by biliverdin reductase (BVR):

biliverdin biliverdin reductase bilirubin
Biliverdin3.svg   Bilirubin ZZ.png
H+ + NADPH NADP+
Biochem reaction arrow forward YYNN horiz med.svg


 
 

Bilirubin is transported into the liver by facilitated diffusion bound to a protein (serum albumin), where it is conjugated with glucuronic acid to become more water-soluble. The reaction is catalyzed by the enzyme UDP-glucuronosyltransferase.

bilirubin UDP-glucuronosyltransferase bilirubin diglucuronide
Bilirubin ZZ.png   Bilirubin diglucuronide.svg
2 UDP-glucuronide 2 UMP + 2 Pi
Biochem reaction arrow forward YYNN horiz med.svg


This form of bilirubin is excreted from the liver in bile. Excretion of bilirubin from liver to biliary canaliculi is an active, energy-dependent and rate-limiting process. The intestinal bacteria deconjugate bilirubin diglucuronide and convert bilirubin to urobilinogens. Some urobilinogen is absorbed by intestinal cells and transported into the kidneys and excreted with urine (urobilin, which is the product of oxidation of urobilinogen, and is responsible for the yellow colour of urine). The remainder travels down the digestive tract and is converted to stercobilinogen. This is oxidized to stercobilin, which is excreted and is responsible for the brown color of feces.

In health and disease

Under homeostasis, the reactivity of heme is controlled by its insertion into the “heme pockets” of hemoproteins. Under oxidative stress however, some hemoproteins, e.g. hemoglobin, can release their heme prosthetic groups. The non-protein-bound (free) heme produced in this manner becomes highly cytotoxic, most probably due to the iron atom contained within its protoporphyrin IX ring, which can act as a Fenton's reagent to catalyze in an unfettered manner the production of free radicals. It catalyzes the oxidation and aggregation of protein, the formation of cytotoxic lipid peroxide via lipid peroxidation and damages DNA through oxidative stress. Due to its lipophilic properties, it impairs lipid bilayers in organelles such as mitochondria and nuclei. These properties of free heme can sensitize a variety of cell types to undergo programmed cell death in response to pro-inflammatory agonists, a deleterious effect that plays an important role in the pathogenesis of certain inflammatory diseases such as malaria and sepsis. There is an association between high intake of heme iron sourced from meat and increased risk of colon cancer. The heme content of red meat is 10 times higher than that of white meat such as chicken.

Genes

The following genes are part of the chemical pathway for making heme:


Relativism

From Wikipedia, the free encyclopedia

Relativism is a family of philosophical views which deny claims to objectivity within a particular domain and assert that facts in that domain are relative to the perspective of an observer or the context in which they are assessed. There are many different forms of relativism, with a great deal of variation in scope and differing degrees of controversy among them. Moral relativism encompasses the differences in moral judgments among people and cultures. Epistemic relativism holds that there are no absolute facts regarding norms of belief, justification, or rationality, and that there are only relative ones. Alethic relativism is the doctrine that there are no absolute truths, i.e., that truth is always relative to some particular frame of reference, such as a language or a culture (cultural relativism). Some forms of relativism also bear a resemblance to philosophical skepticism. Descriptive relativism seeks to describe the differences among cultures and people without evaluation, while normative relativism evaluates the morality or truthfulness of views within a given framework.

Forms of relativism

Anthropological versus philosophical relativism

Anthropological relativism refers to a methodological stance, in which the researcher suspends (or brackets) his or her own cultural prejudice while trying to understand beliefs or behaviors in their contexts. This has become known as methodological relativism, and concerns itself specifically with avoiding ethnocentrism or the application of one's own cultural standards to the assessment of other cultures. This is also the basis of the so-called "emic" and "etic" distinction, in which:

  • An emic or insider account of behavior is a description of a society in terms that are meaningful to the participant or actor's own culture; an emic account is therefore culture-specific, and typically refers to what is considered "common sense" within the culture under observation.
  • An etic or outsider account is a description of a society by an observer, in terms that can be applied to other cultures; that is, an etic account is culturally neutral, and typically refers to the conceptual framework of the social scientist. (This is complicated when it is scientific research itself that is under study, or when there is theoretical or terminological disagreement within the social sciences.)

Philosophical relativism, in contrast, asserts that the truth of a proposition depends on the metaphysical, or theoretical frame, or the instrumental method, or the context in which the proposition is expressed, or on the person, groups, or culture who interpret the proposition.

Methodological relativism and philosophical relativism can exist independently from one another, but most anthropologists base their methodological relativism on that of the philosophical variety.

Descriptive versus normative relativism

The concept of relativism also has importance both for philosophers and for anthropologists in another way. In general, anthropologists engage in descriptive relativism ("how things are" or "how things seem"), whereas philosophers engage in normative relativism ("how things ought to be"), although there is some overlap (for example, descriptive relativism can pertain to concepts, normative relativism to truth).

Descriptive relativism assumes that certain cultural groups have different modes of thought, standards of reasoning, and so forth, and it is the anthropologist's task to describe, but not to evaluate the validity of these principles and practices of a cultural group. It is possible for an anthropologist in his or her fieldwork to be a descriptive relativist about some things that typically concern the philosopher (e.g., ethical principles) but not about others (e.g., logical principles). However, the descriptive relativist's empirical claims about epistemic principles, moral ideals and the like are often countered by anthropological arguments that such things are universal, and much of the recent literature on these matters is explicitly concerned with the extent of, and evidence for, cultural or moral or linguistic or human universals.

The fact that the various species of descriptive relativism are empirical claims, may tempt the philosopher to conclude that they are of little philosophical interest, but there are several reasons why this isn't so. First, some philosophers, notably Kant, argue that certain sorts of cognitive differences between human beings (or even all rational beings) are impossible, so such differences could never be found to obtain in fact, an argument that places a priori limits on what empirical inquiry could discover and on what versions of descriptive relativism could be true. Second, claims about actual differences between groups play a central role in some arguments for normative relativism (for example, arguments for normative ethical relativism often begin with claims that different groups in fact have different moral codes or ideals). Finally, the anthropologist's descriptive account of relativism helps to separate the fixed aspects of human nature from those that can vary, and so a descriptive claim that some important aspect of experience or thought does (or does not) vary across groups of human beings tells us something important about human nature and the human condition.

Normative relativism concerns normative or evaluative claims that modes of thought, standards of reasoning, or the like are only right or wrong relative to a framework. ‘Normative’ is meant in a general sense, applying to a wide range of views; in the case of beliefs, for example, normative correctness equals truth. This does not mean, of course, that framework-relative correctness or truth is always clear, the first challenge being to explain what it amounts to in any given case (e.g., with respect to concepts, truth, epistemic norms). Normative relativism (say, in regard to normative ethical relativism) therefore implies that things (say, ethical claims) are not simply true in themselves, but only have truth values relative to broader frameworks (say, moral codes). (Many normative ethical relativist arguments run from premises about ethics to conclusions that assert the relativity of truth values, bypassing general claims about the nature of truth, but it is often more illuminating to consider the type of relativism under question directly.)

Related and contrasting positions

Relationism is the theory that there are only relations between individual entities, and no intrinsic properties. Despite the similarity in name, it is held by some to be a position distinct from relativism—for instance, because "statements about relational properties [...] assert an absolute truth about things in the world". On the other hand, others wish to equate relativism, relationism and even relativity, which is a precise theory of relationships between physical objects: Nevertheless, "This confluence of relativity theory with relativism became a strong contributing factor in the increasing prominence of relativism".

Whereas previous investigations of science only sought sociological or psychological explanations of failed scientific theories or pathological science, the 'strong programme' is more relativistic, assessing scientific truth and falsehood equally in a historic and cultural context.

Criticisms

A common argument against relativism suggests that it inherently contradicts, refutes, or stultifies itself: the statement "all is relative" classes either as a relative statement or as an absolute one. If it is relative, then this statement does not rule out absolutes. If the statement is absolute, on the other hand, then it provides an example of an absolute statement, proving that not all truths are relative. However, this argument against relativism only applies to relativism that positions truth as relative–i.e. epistemological/truth-value relativism. More specifically, it is only extreme forms of epistemological relativism that can come in for this criticism as there are many epistemological relativists who posit that some aspects of what is regarded as factually "true" are not universal, yet still accept that other universal truths exist (e.g. gas laws or moral laws).

Another argument against relativism posits a Natural Law. Simply put, the physical universe works under basic principles: the "Laws of Nature". Some contend that a natural Moral Law may also exist, for example as argued by Richard Dawkins in The God Delusion (2006) and addressed by C. S. Lewis in "Mere Christianity" (1952). Dawkins said "I think we face an equal but much more sinister challenge from the left, in the shape of cultural relativism - the view that scientific truth is only one kind of truth and it is not to be especially privileged". Philosopher Hilary Putnam, among others, states that some forms of relativism make it impossible to believe one is in error. If there is no truth beyond an individual's belief that something is true, then an individual cannot hold their own beliefs to be false or mistaken. A related criticism is that relativizing truth to individuals destroys the distinction between truth and belief.

Views

Ancient India

Ancient Indian philosophers Mahavira (c. 599 – c. 527 BC) and Nagarjuna (c. 150 – c. 250 BC) made contributions to the development of relativist philosophy.

Sophism

Sophists are considered the founding fathers of relativism in Western philosophy. Elements of relativism emerged among the Sophists in the 5th century BC. Notably, it was Protagoras who coined the phrase, "Man is the measure of all things: of things which are, that they are, and of things which are not, that they are not." The thinking of the Sophists is mainly known through their opponent, Plato. In a paraphrase from Plato's dialogue Protagoras, Protagoras said: "What is true for you is true for you, and what is true for me is true for me."

Pyrrhonism

Pyrrhonist philosophy views relativity as a reason for philosophical skepticism, as it is one of the reasons that truth cannot be grasped. All perception is relative to a perceiver, and perception differs according to position. Hence, no particular perception can be judged as representing the truth about what is perceived. Arguments from relativity form the basis of trope 8 of the ten modes of Aenesidemus and trope 3 of the five modes of Agrippa.

Modern

Bernard Crick

Bernard Crick, a British political scientist and advocate of relativism, wrote the book In Defence of Politics (first published in 1962), suggesting the inevitability of moral conflict between people. Crick stated that only ethics could resolve such conflict, and when that occurred in public it resulted in politics. Accordingly, Crick saw the process of dispute resolution, harms reduction, mediation or peacemaking as central to all of moral philosophy. He became an important influence on the feminists and later on the Greens.

Paul Feyerabend

The philosopher of science Paul Feyerabend is often considered to be a relativist, though he denied being one.

Feyerabend argued that modern science suffers from being methodologically monistic (the belief that only a single methodology can produce scientific progress). Feyerabend summarises his case in his work Against Method with the phrase "anything goes".

In an aphorism [Feyerabend] often repeated, "potentially every culture is all cultures". This is intended to convey that world views are not hermetically closed, since their leading concepts have an "ambiguity" - better, an open-endedness - which enables people from other cultures to engage with them. [...] It follows that relativism, understood as the doctrine that truth is relative to closed systems, can get no purchase. [...] For Feyerabend, both hermetic relativism and its absolutist rival [realism] serve, in their different ways, to "devalue human existence". The former encourages that unsavoury brand of political correctness which takes the refusal to criticise "other cultures" to the extreme of condoning murderous dictatorship and barbaric practices. The latter, especially in its favoured contemporary form of "scientific realism", with the excessive prestige it affords to the abstractions of "the monster 'science'", is in bed with a politics which likewise disdains variety, richness and everyday individuality - a politics which likewise "hides" its norms behind allegedly neutral facts, "blunts choices and imposes laws".
Thomas Kuhn

Thomas Kuhn's philosophy of science, as expressed in The Structure of Scientific Revolutions is often interpreted as relativistic. He claimed that as well as progressing steadily and incrementally ("normal science"), science undergoes periodic revolutions or "paradigm shifts", leaving scientists working in different paradigms with difficulty in even communicating. Thus the truth of a claim, or the existence of a posited entity is relative to the paradigm employed. However, it isn't necessary for him to embrace relativism because every paradigm presupposes the prior, building upon itself through history and so on. This leads to there being a fundamental, incremental, and referential structure of development which is not relative but again, fundamental.

From these remarks, one thing is however certain: Kuhn is not saying that incommensurable theories cannot be compared - what they can’t be is compared in terms of a system of common measure. He very plainly says that they can be compared, and he reiterates this repeatedly in later work, in a (mostly in vain) effort to avert the crude and sometimes catastrophic misinterpretations he suffered from mainstream philosophers and post-modern relativists alike.

But Thomas Kuhn denied the accusation of being a relativist later in his postscript.

scientific development is ... a unidirectional and irreversible process. Latter scientific theories are better than earlier ones for solving puzzles ... That is not a relativist's position, and it displays the sense in which I am a convinced believer in scientific progress.

Some have argued that one can also read Kuhn's work as essentially positivist in its ontology: the revolutions he posits are epistemological, lurching toward a presumably 'better' understanding of an objective reality through the lens presented by the new paradigm. However, a number of passages in Structures do indeed appear to be distinctly relativist, and to directly challenge the notion of an objective reality and the ability of science to progress towards an ever-greater grasp of it, particularly through the process of paradigm change.

In the sciences there need not be progress of another sort. We may, to be more precise, have to relinquish the notion, explicit or implicit, that changes of paradigm carry scientists and those who learn from them closer and closer to the truth.
We are all deeply accustomed to seeing science as the one enterprise that draws constantly nearer to some goal set by nature in advance. But need there be any such goal? Can we not account for both science’s existence and its success in terms of evolution from the community’s state of knowledge at any given time? Does it really help to imagine that there is some one full, objective, true account of nature and that the proper measure of scientific achievement is the extent to which it brings us closer to that ultimate goal?
George Lakoff and Mark Johnson

George Lakoff and Mark Johnson define relativism in their book Metaphors We Live By as the rejection of both subjectivism and metaphysical objectivism in order to focus on the relationship between them, i.e. the metaphor by which we relate our current experience to our previous experience. In particular, Lakoff and Johnson characterize "objectivism" as a "straw man", and, to a lesser degree, criticize the views of Karl Popper, Kant and Aristotle.

Robert Nozick

In his book Invariances, Robert Nozick expresses a complex set of theories about the absolute and the relative. He thinks the absolute/relative distinction should be recast in terms of an invariant/variant distinction, where there are many things a proposition can be invariant with regard to or vary with. He thinks it is coherent for truth to be relative, and speculates that it might vary with time. He thinks necessity is an unobtainable notion, but can be approximated by robust invariance across a variety of conditions—although we can never identify a proposition that is invariant with regard to everything. Finally, he is not particularly warm to one of the most famous forms of relativism, moral relativism, preferring an evolutionary account.

Joseph Margolis

Joseph Margolis advocates a view he calls "robust relativism" and defends it in his books: Historied Thought, Constructed World, Chapter 4 (California, 1995) and The Truth about Relativism (Blackwells, 1991). He opens his account by stating that our logics should depend on what we take to be the nature of the sphere to which we wish to apply our logics. Holding that there can be no distinctions which are not "privileged" between the alethic, the ontic, and the epistemic, he maintains that a many valued logic just might be the most apt for aesthetics or history since, because in these practices, we are loath to hold to simple binary logic; and he also holds that many-valued logic is relativistic. (This is perhaps an unusual definition of "relativistic". Compare with his comments on "relationism"). "True" and "False" as mutually exclusive and exhaustive judgements on Hamlet, for instance, really does seem absurd. A many valued logic—"apt", "reasonable", "likely", and so on—seems intuitively more applicable to Hamlet interpretation. Where apparent contradictions arise between such interpretations, we might call the interpretations "incongruent", rather than dubbing either "false", because using many-valued logic implies that a measured value is a mixture of two extreme possibilities. Using the subset of many-valued logic, fuzzy logic, it can be said that various interpretations can be represented by membership in more than one possible truth sets simultaneously. Fuzzy logic is therefore probably the best mathematical structure for understanding "robust relativism" and has been interpreted by Bart Kosko as philosophically being related to Zen Buddhism.

It was Aristotle who held that relativism implied we should, sticking with appearances only, end up contradicting ourselves somewhere if we could apply all attributes to all ousiai (beings). Aristotle, however, made non-contradiction dependent upon his essentialism. If his essentialism is false, then so too is his ground for disallowing relativism. (Subsequent philosophers have found other reasons for supporting the principle of non-contradiction).

Beginning with Protagoras and invoking Charles Sanders Peirce, Margolis shows that the historic struggle to discredit relativism is an attempt to impose an unexamined belief in the world's essentially rigid rule-like nature. Plato and Aristotle merely attacked "relationalism"—the doctrine of true-for l or true for k, and the like, where l and k are different speakers or different worlds, or the something similar (Most philosophers would call this position "relativism"). For Margolis, "true" means true; that is, the alethic use of "true" remains untouched. However, in real world contexts, and context is ubiquitous in the real world, we must apply truth values. Here, in epistemic terms, we might retire "true" tout court as an evaluation and keep "false". The rest of our value-judgements could be graded from "extremely plausible" down to "false". Judgements which on a bivalent logic would be incompatible or contradictory are further seen as "incongruent", though one may well have more weight than the other. In short, relativistic logic is not, or need not be, the bugbear it is often presented to be. It may simply be the best type of logic to apply to certain very uncertain spheres of real experiences in the world (although some sort of logic needs to be applied to make that judgement). Those who swear by bivalent logic might simply be the ultimate keepers of the great fear of the flux.

Richard Rorty

Philosopher Richard Rorty has a somewhat paradoxical role in the debate over relativism: he is criticized for his relativistic views by many commentators, but has always denied that relativism applies to much anybody, being nothing more than a Platonic scarecrow. Rorty claims, rather, that he is a pragmatist, and that to construe pragmatism as relativism is to beg the question.

'"Relativism" is the traditional epithet applied to pragmatism by realists'
'"Relativism" is the view that every belief on a certain topic, or perhaps about any topic, is as good as every other. No one holds this view. Except for the occasional cooperative freshman, one cannot find anybody who says that two incompatible opinions on an important topic are equally good. The philosophers who get called 'relativists' are those who say that the grounds for choosing between such opinions are less algorithmic than had been thought.'
'In short, my strategy for escaping the self-referential difficulties into which "the Relativist" keeps getting himself is to move everything over from epistemology and metaphysics into cultural politics, from claims to knowledge and appeals to self-evidence to suggestions about what we should try.'

Rorty takes a deflationary attitude to truth, believing there is nothing of interest to be said about truth in general, including the contention that it is generally subjective. He also argues that the notion of warrant or justification can do most of the work traditionally assigned to the concept of truth, and that justification is relative; justification is justification to an audience, for Rorty.

In Contingency, Irony, and Solidarity he argues that the debate between so-called relativists and so-called objectivists is beside the point because they don't have enough premises in common for either side to prove anything to the other.

Nalin de Silva

In his book Mage Lokaya (My World), 1986, Nalin de Silva criticized the basis of the established western system of knowledge, and its propagation, which he refers as "domination throughout the world".He explained in this book that mind independent reality is impossible and knowledge is not found but constructed. Further he has introduced and developed the concept of "Constructive Relativism" as the basis on which knowledge is constructed relative to the sense organs, culture and the mind completely based on Avidya.

Postmodernism

The term "relativism" often comes up in debates over postmodernism, poststructuralism and phenomenology. Critics of these perspectives often identify advocates with the label "relativism". For example, the Sapir–Whorf hypothesis is often considered a relativist view because it posits that linguistic categories and structures shape the way people view the world. Stanley Fish has defended postmodernism and relativism.

These perspectives do not strictly count as relativist in the philosophical sense, because they express agnosticism on the nature of reality and make epistemological rather than ontological claims. Nevertheless, the term is useful to differentiate them from realists who believe that the purpose of philosophy, science, or literary critique is to locate externally true meanings. Important philosophers and theorists such as Michel Foucault, Max Stirner, political movements such as post-anarchism or post-Marxism can also be considered as relativist in this sense - though a better term might be social constructivist.

The spread and popularity of this kind of "soft" relativism varies between academic disciplines. It has wide support in anthropology and has a majority following in cultural studies. It also has advocates in political theory and political science, sociology, and continental philosophy (as distinct from Anglo-American analytical philosophy). It has inspired empirical studies of the social construction of meaning such as those associated with labelling theory, which defenders can point to as evidence of the validity of their theories (albeit risking accusations of performative contradiction in the process). Advocates of this kind of relativism often also claim that recent developments in the natural sciences, such as Heisenberg's uncertainty principle, quantum mechanics, chaos theory and complexity theory show that science is now becoming relativistic. However, many scientists who use these methods continue to identify as realist or post-positivist, and some sharply criticize the association.

Religious

Jainism

Mahavira (599-527 BC), the 24th Tirthankara of Jainism, developed an early philosophy regarding relativism and subjectivism known as Anekantavada.

Hinduism

Hindu religion has no theological difficulties in accepting degrees of truth in other religions. A Rig Vedic hymn states that "Truth is One, though the sages tell it variously." (Ékam sat vipra bahudā vadanti)

Buddhism

Madhyamaka Buddhism, which forms the basis for many Mahayana Buddhist schools and which was founded by Nagarjuna. Nāgārjuna taught the idea of relativity. In the Ratnāvalī, he gives the example that shortness exists only in relation to the idea of length. The determination of a thing or object is only possible in relation to other things or objects, especially by way of contrast. He held that the relationship between the ideas of "short" and "long" is not due to intrinsic nature (svabhāva). This idea is also found in the Pali Nikāyas and Chinese Āgamas, in which the idea of relativity is expressed similarly: "That which is the element of light ... is seen to exist on account of [in relation to] darkness; that which is the element of good is seen to exist on account of bad; that which is the element of space is seen to exist on account of form."

Madhyamaka Buddhism discerns two levels of truth, absolute and relative. The two truths doctrine states that there is Relative or common-sense truth, which describes our daily experience of a concrete world, and Ultimate truth, which describes the ultimate reality as sunyata, empty of concrete and inherent characteristics. The conventional truth may be interpreted as "obscurative truth" or "that which obscures the true nature" as a result. It is constituted by the appearances of mistaken awareness. Conventional truth would be the appearance that includes a duality of apprehender and apprehended, and objects perceived within that. Ultimate truths, are phenomena free from the duality of apprehender and apprehended.

Sikhism

In Sikhism the Gurus (spiritual teacher ) have propagated the message of "many paths" leading to the one God and ultimate salvation for all souls who tread on the path of righteousness. They have supported the view that proponents of all faiths can, by doing good and virtuous deeds and by remembering the Lord, certainly achieve salvation. The students of the Sikh faith are told to accept all leading faiths as possible vehicles for attaining spiritual enlightenment provided the faithful study, ponder and practice the teachings of their prophets and leaders. The holy book of the Sikhs called the Sri Guru Granth Sahib says: "Do not say that the Vedas, the Bible and the Koran are false. Those who do not contemplate them are false." Guru Granth Sahib page 1350; later stating "The seconds, minutes, and hours, days, weeks and months, and the various seasons originate from the one Sun; O nanak, in just the same way, the many forms originate from the Creator." Guru Granth Sahib page 12,13.

Catholicism

The Catholic Church, especially under John Paul II and Pope Benedict XVI, has identified relativism as one of the most significant problems for faith and morals today.

According to the Church and to some theologians, relativism, as a denial of absolute truth, leads to moral license and a denial of the possibility of sin and of God. Whether moral or epistemological, relativism constitutes a denial of the capacity of the human mind and reason to arrive at truth. Truth, according to Catholic theologians and philosophers (following Aristotle) consists of adequatio rei et intellectus, the correspondence of the mind and reality. Another way of putting it states that the mind has the same form as reality. This means when the form of the computer in front of someone (the type, color, shape, capacity, etc.) is also the form that is in their mind, then what they know is true because their mind corresponds to objective reality.

The denial of an absolute reference, of an axis mundi, denies God, who equates to Absolute Truth, according to these Christian theologians. They link relativism to secularism, an obstruction of religion in human life.

Leo XIII

Pope Leo XIII (1810–1903) was the first known Pope to use the word relativism in the encyclical Humanum genus (1884). Leo XIII condemned Freemasonry and claimed that its philosophical and political system was largely based on relativism.

John Paul II

John Paul II in Veritatis Splendor

As is immediately evident, the crisis of truth is not unconnected with this development. Once the idea of a universal truth about the good, knowable by human reason, is lost, inevitably the notion of conscience also changes. Conscience is no longer considered in its primordial reality as an act of a person's intelligence, the function of which is to apply the universal knowledge of the good in a specific situation and thus to express a judgment about the right conduct to be chosen here and now. Instead, there is a tendency to grant to the individual conscience the prerogative of independently determining the criteria of good and evil and then acting accordingly. Such an outlook is quite congenial to an individualist ethic, wherein each individual is faced with his own truth, different from the truth of others. Taken to its extreme consequences, this individualism leads to a denial of the very idea of human nature.

In Evangelium Vitae (The Gospel of Life), he says:

Freedom negates and destroys itself, and becomes a factor leading to the destruction of others, when it no longer recognizes and respects its essential link with the truth. When freedom, out of a desire to emancipate itself from all forms of tradition and authority, shuts out even the most obvious evidence of an objective and universal truth, which is the foundation of personal and social life, then the person ends up by no longer taking as the sole and indisputable point of reference for his own choices the truth about good and evil, but only his subjective and changeable opinion or, indeed, his selfish interest and whim.
Benedict XVI

In April 2005, in his homily during Mass prior to the conclave which would elect him as Pope, then Cardinal Joseph Ratzinger talked about the world "moving towards a dictatorship of relativism":

How many winds of doctrine we have known in recent decades, how many ideological currents, how many ways of thinking. The small boat of thought of many Christians has often been tossed about by these waves – thrown from one extreme to the other: from Marxism to liberalism, even to libertinism; from collectivism to radical individualism; from atheism to a vague religious mysticism; from agnosticism to syncretism, and so forth. Every day new sects are created and what Saint Paul says about human trickery comes true, with cunning which tries to draw those into error (cf Ephesians 4, 14). Having a clear Faith, based on the Creed of the Church, is often labeled today as a fundamentalism. Whereas, relativism, which is letting oneself be tossed and "swept along by every wind of teaching", looks like the only attitude acceptable to today's standards. We are moving towards a dictatorship of relativism which does not recognize anything as certain and which has as its highest goal one's own ego and one's own desires. However, we have a different goal: the Son of God, true man. He is the measure of true humanism. Being an "Adult" means having a faith which does not follow the waves of today's fashions or the latest novelties. A faith which is deeply rooted in friendship with Christ is adult and mature. It is this friendship which opens us up to all that is good and gives us the knowledge to judge true from false, and deceit from truth.

On June 6, 2005, Pope Benedict XVI told educators:

Today, a particularly insidious obstacle to the task of education is the massive presence in our society and culture of that relativism which, recognizing nothing as definitive, leaves as the ultimate criterion only the self with its desires. And under the semblance of freedom it becomes a prison for each one, for it separates people from one another, locking each person into his or her own 'ego'.

Then during the World Youth Day in August 2005, he also traced to relativism the problems produced by the communist and sexual revolutions, and provided a counter-counter argument.

In the last century we experienced revolutions with a common programme–expecting nothing more from God, they assumed total responsibility for the cause of the world in order to change it. And this, as we saw, meant that a human and partial point of view was always taken as an absolute guiding principle. Absolutizing what is not absolute but relative is called totalitarianism. It does not liberate man, but takes away his dignity and enslaves him. It is not ideologies that save the world, but only a return to the living God, our Creator, the Guarantor of our freedom, the Guarantor of what is really good and true.

Münchhausen trilemma

From Wikipedia, the free encyclopedia
 
Baron Munchausen pulls himself out of a mire by his own hair.

In epistemology, the Münchhausen trilemma is a thought experiment used to demonstrate the impossibility of proving any truth, even in the fields of logic and mathematics. If it is asked how any given proposition is known to be true, proof may be provided. Yet that same question can be asked of the proof, and any subsequent proof. The Münchhausen trilemma is that there are only three ways of completing a proof:

The trilemma, then, is the decision among the three equally unsatisfying options.

The name Münchhausen-Trilemma was coined by the German philosopher Hans Albert in 1968 in reference to a trilemma of "dogmatism versus infinite regress versus psychologism" used by Karl Popper. It is a reference to the problem of "bootstrapping", based on the story of Baron Munchausen (in German, "Münchhausen") pulling himself and the horse on which he was sitting out of a mire by his own hair. Like Munchausen, who cannot make progress because he has no solid ground to stand on, any purported justification of all knowledge must fail, because it must start from a position of no knowledge, and therefore cannot make progress. It must either start with some knowledge, as with dogmatism, not start at all, as with infinite regress, or be a circular argument, justified only by itself and have no solid foundation, much like Munchausen is only pulling on himself rather than some external handhold.

It is also known as Agrippa's trilemma or the Agrippan trilemma after a similar argument reported by Sextus Empiricus, which was attributed to Agrippa the Skeptic by Diogenes Laërtius. Sextus' argument, however, consists of five (not three) "modes". Popper in his original 1935 publication mentions neither Sextus nor Agrippa, but instead attributes his trilemma to German philosopher Jakob Friedrich Fries, leading some to call it Fries's trilemma as a result.

In contemporary epistemology, advocates of coherentism are supposed to accept the "circular" horn of the trilemma; foundationalists rely on the axiomatic argument. The view that accepts infinite regress is called infinitism.

Agrippa and the Pyrrhonists

The following tropes or "modes" for Pyrrhonism are given by Sextus Empiricus, in his Outlines of Pyrrhonism. According to Sextus, they are attributed "to the more recent Pyrrhonists" and by Diogenes Laërtius attributed to Agrippa the Skeptic. The tropes are:

  • Dissent – The uncertainty demonstrated by the differences of opinions among philosophers and people in general.
  • Progress ad infinitum – All proof rests on matters themselves in need of proof, and so on to infinity. https://en.wikipedia.org/wiki/M%C3%BCnchhausen_trilemma?
  • Relation – All things are changed as their relations become changed, or, as they are looked upon from different points of view.
  • Assumption – The truth asserted is based on an unsupported assumption.
  • Circularity – the truth asserted involves a circularity of proofs (known in scholasticism as "diallelus")

According to the mode deriving from dispute, we find that undecidable dissension about the matter proposed has come about both in ordinary life and among philosophers. Because of this we are not able to choose or to rule out anything, and we end up with suspension of judgement. In the mode deriving from infinite regress, we say that what is brought forward as a source of conviction for the matter proposed itself needs another such source, which itself needs another, and so ad infinitum, so that we have no point from which to begin to establish anything, and suspension of judgement follows. In the mode deriving from relativity, as we said above, the existing object appears to be such-and-such relative to the subject judging and to the things observed together with it, but we suspend judgement on what it is like in its nature. We have the mode from hypothesis when the Dogmatists, being thrown back ad infinitum, begin from something which they do not establish but claim to assume simply and without proof in virtue of a concession. The reciprocal mode occurs when what ought to be confirmatory of the object under investigation needs to be made convincing by the object under investigation; then, being unable to take either in order to establish the other, we suspend judgement about both.

With reference to these five tropes, the first and third are a short summary of the ten modes of Aenesidemus which were the basis of earlier Pyrrhonism. The three additional ones show a progress in the Pyrrhonist system, and a transition from the common objections derived from the fallibility of sense and opinion, to more abstract and metaphysical grounds of skepticism.

According to Victor Brochard, "the five tropes can be regarded as the most radical and most precise formulation of skepticism that has ever been given. In a sense, they are still irresistible today."

Fries's trilemma

Jakob Friedrich Fries formulated a similar trilemma in which statements can be accepted either:

The first two possibilities are rejected by Fries as unsatisfactory, requiring his adopting the third option. Karl Popper argued that a way to avoid the trilemma was to use an intermediate approach incorporating some dogmatism, some infinite regress, and some perceptual experience.

Albert's formulation

The argument proposed by Hans Albert runs as follows: All of the only three possible attempts to get a certain justification must fail:

  • All justifications in pursuit of "certain" knowledge have also to justify the means of their justification and doing so they have to justify anew the means of their justification. Therefore, there can be no end, only the hopeless situation of infinite regression
  • A circular argument can be used to justify by its mock impression of validity and soundness, but this sacrifices its usefulness (as the conclusion and premise are one and the same, no advancement in knowledge has taken place).
  • One can stop at self-evidence or common sense or fundamental principles or speaking ex cathedra or at any other evidence, but in doing so, the intention to install 'certain' justification is abandoned.

An English translation of a quote from the original German text by Albert is as follows:

Here, one has a mere choice between:

  1. An infinite regression, which appears because of the necessity to go ever further back, but is not practically feasible and does not, therefore, provide a certain foundation.
  2. A logical circle in the deduction, which is caused by the fact that one, in the need to found, falls back on statements which had already appeared before as requiring a foundation, and which circle does not lead to any certain foundation either.
  3. A break of searching at a certain point, which indeed appears principally feasible, but would mean a random suspension of the principle of sufficient reason.

Albert stressed repeatedly that there is no limitation of the Münchhausen trilemma to deductive conclusions. The verdict concerns also inductive, causal, transcendental, and all otherwise structured justifications. They all will be in vain.

Therefore, certain justification is impossible to attain. Once having given up the classical idea of certain knowledge, one can stop the process of justification where one wants to stop, presupposed one is ready to start critical thinking at this point always anew if necessary.

This trilemma rounds off the classical problem of justification in the theory of knowledge.

The failure of proving exactly any truth as expressed by the Münchhausen trilemma does not have to lead to dismissal of objectivity, as with relativism. One example of an alternative is the fallibilism of Karl Popper and Hans Albert, accepting that certainty is impossible, but that it is best to get as close as possible to truth, while remembering our uncertainty.

In Albert's view, the impossibility to prove any certain truth is not in itself a certain truth. After all, one needs to assume some basic rules of logical inference to derive his result, and in doing so must either abandon the pursuit of "certain" justification, as above, or attempt to justify these rules, etc. He suggests that it has to be taken as true as long as nobody has come forward with a truth which is scrupulously justified as a certain truth. Several philosophers defied Albert's challenge; his responses to such criticisms can be found in his long addendum to his Treatise on Critical Reason and later articles.

Cryogenics

From Wikipedia, the free encyclopedia https://en.wikipedia.org/wiki/Cryogenics...