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Saturday, August 19, 2023

Alternation of generations

Diagram showing the alternation of generations between a diploid sporophyte (bottom) and a haploid gametophyte (top)

Alternation of generations (also known as metagenesis or heterogenesis) is the predominant type of life cycle in plants and algae. In plants both phases are multicellular: the haploid sexual phase – the gametophyte – alternates with a diploid asexual phase – the sporophyte.

A mature sporophyte produces haploid spores by meiosis, a process which reduces the number of chromosomes to half, from two sets to one. The resulting haploid spores germinate and grow into multicellular haploid gametophytes. At maturity, a gametophyte produces gametes by mitosis, the normal process of cell division in eukaryotes, which maintains the original number of chromosomes. Two haploid gametes (originating from different organisms of the same species or from the same organism) fuse to produce a diploid zygote, which divides repeatedly by mitosis, developing into a multicellular diploid sporophyte. This cycle, from gametophyte to sporophyte (or equally from sporophyte to gametophyte), is the way in which all land plants and most algae undergo sexual reproduction.

The relationship between the sporophyte and gametophyte phases varies among different groups of plants. In the majority of algae, the sporophyte and gametophyte are separate independent organisms, which may or may not have a similar appearance. In liverworts, mosses and hornworts, the sporophyte is less well developed than the gametophyte and is largely dependent on it. Although moss and hornwort sporophytes can photosynthesise, they require additional photosynthate from the gametophyte to sustain growth and spore development and depend on it for supply of water, mineral nutrients and nitrogen. By contrast, in all modern vascular plants the gametophyte is less well developed than the sporophyte, although their Devonian ancestors had gametophytes and sporophytes of approximately equivalent complexity. In ferns the gametophyte is a small flattened autotrophic prothallus on which the young sporophyte is briefly dependent for its nutrition. In flowering plants, the reduction of the gametophyte is much more extreme; it consists of just a few cells which grow entirely inside the sporophyte.

Animals develop differently. They directly produce haploid gametes. No haploid spores capable of dividing are produced, so generally there is no multicellular haploid phase. Some insects have a sex-determining system whereby haploid males are produced from unfertilized eggs; however females produced from fertilized eggs are diploid.

Life cycles of plants and algae with alternating haploid and diploid multicellular stages are referred to as diplohaplontic. The equivalent terms haplodiplontic, diplobiontic and dibiontic are also in use, as is describing such an organism as having a diphasic ontogeny. Life cycles of animals, in which there is only a diploid multicellular stage, are referred to as diplontic. Life cycles in which there is only a haploid multicellular stage are referred to as haplontic.

Definition

Alternation of generations is defined as the alternation of multicellular diploid and haploid forms in the organism's life cycle, regardless of whether these forms are free-living. In some species, such as the alga Ulva lactuca, the diploid and haploid forms are indeed both free-living independent organisms, essentially identical in appearance and therefore said to be isomorphic. In many algae, the free-swimming, haploid gametes form a diploid zygote which germinates into a multicellular diploid sporophyte. The sporophyte produces free-swimming haploid spores by meiosis that germinate into haploid gametophytes.

However, in land plants, either the sporophyte or the gametophyte is very much reduced and is incapable of free living. For example, in all bryophytes the gametophyte generation is dominant and the sporophyte is dependent on it. By contrast, in all seed plants the gametophytes are strongly reduced, although the fossil evidence indicates that they were derived from isomorphic ancestors. In seed plants, the female gametophyte develops totally within the sporophyte, which protects and nurtures it and the embryonic sporophyte that it produces. The pollen grains, which are the male gametophytes, are reduced to only a few cells (just three cells in many cases). Here the notion of two generations is less obvious; as Bateman & Dimichele say "sporophyte and gametophyte effectively function as a single organism". The alternative term 'alternation of phases' may then be more appropriate.

History

Debates about alternation of generations in the early twentieth century can be confusing because various ways of classifying "generations" co-exist (sexual vs. asexual, gametophyte vs. sporophyte, haploid vs. diploid, etc.).

Initially, Chamisso and Steenstrup described the succession of differently organized generations (sexual and asexual) in animals as "alternation of generations", while studying the development of tunicates, cnidarians and trematode animals. This phenomenon is also known as heterogamy. Presently, the term "alternation of generations" is almost exclusively associated with the life cycles of plants, specifically with the alternation of haploid gametophytes and diploid sporophytes.

Wilhelm Hofmeister demonstrated the morphological alternation of generations in plants, between a spore-bearing generation (sporophyte) and a gamete-bearing generation (gametophyte). By that time, a debate emerged focusing on the origin of the asexual generation of land plants (i.e., the sporophyte) and is conventionally characterized as a conflict between theories of antithetic (Čelakovský, 1874) and homologous (Pringsheim, 1876) alternation of generations. Čelakovský coined the words sporophyte and gametophyte.

Eduard Strasburger (1874) discovered the alternation between diploid and haploid nuclear phases, also called cytological alternation of nuclear phases. Although most often coinciding, morphological alternation and nuclear phases alternation are sometimes independent of one another, e.g., in many red algae, the same nuclear phase may correspond to two diverse morphological generations. In some ferns which lost sexual reproduction, there is no change in nuclear phase, but the alternation of generations is maintained.

Alternation of generations in plants

Fundamental elements

The diagram above shows the fundamental elements of the alternation of generations in plants. There are many variations in different groups of plants. The processes involved are as follows:

  • Two single-celled haploid gametes, each containing n unpaired chromosomes, fuse to form a single-celled diploid zygote, which now contains n pairs of chromosomes, i.e. 2n chromosomes in total.follows:
  • The single-celled diploid zygote germinates, dividing by the normal process (mitosis), which maintains the number of chromosomes at 2n. The result is a multi-cellular diploid organism, called the sporophyte (because at maturity it produces spores).
  • When it reaches maturity, the sporophyte produces one or more sporangia (singular: sporangium) which are the organs that produce diploid spore mother cells (sporocytes). These divide by a special process (meiosis) that reduces the number of chromosomes by a half. This initially results in four single-celled haploid spores, each containing n unpaired chromosomes.
  • The single-celled haploid spore germinates, dividing by the normal process (mitosis), which maintains the number of chromosomes at n. The result is a multi-cellular haploid organism, called the gametophyte (because it produces gametes at maturity).
  • When it reaches maturity, the gametophyte produces one or more gametangia (singular: gametangium) which are the organs that produce haploid gametes. At least one kind of gamete possesses some mechanism for reaching another gamete in order to fuse with it.

The 'alternation of generations' in the life cycle is thus between a diploid (2n) generation of multicellular sporophytes and a haploid (n) generation of multicellular gametophytes.

Gametophyte of the fern Onoclea sensibilis (flat thallus, bottom) with a descendant sporophyte beginning to grow from it (small frond, top).

The situation is quite different from that in animals, where the fundamental process is that a multicellular diploid (2n) individual directly produces haploid (n) gametes by meiosis. In animals, spores (i.e. haploid cells which are able to undergo mitosis) are not produced, so there is no asexual multicellular generation. Some insects have haploid males that develop from unfertilized eggs, but the females are all diploid.

Variations

The diagram shown above is a good representation of the life cycle of some multi-cellular algae (e.g. the genus Cladophora) which have sporophytes and gametophytes of almost identical appearance and which do not have different kinds of spores or gametes.

However, there are many possible variations on the fundamental elements of a life cycle which has alternation of generations. Each variation may occur separately or in combination, resulting in a bewildering variety of life cycles. The terms used by botanists in describing these life cycles can be equally bewildering. As Bateman and Dimichele say "[...] the alternation of generations has become a terminological morass; often, one term represents several concepts or one concept is represented by several terms."

Possible variations are:

  • Relative importance of the sporophyte and the gametophyte.
    • Equal (homomorphy or isomorphy).
      Filamentous algae of the genus Cladophora, which are predominantly found in fresh water, have diploid sporophytes and haploid gametophytes which are externally indistinguishable. No living land plant has equally dominant sporophytes and gametophytes, although some theories of the evolution of alternation of generations suggest that ancestral land plants did.
    • Unequal (heteromorphy or anisomorphy).
      Gametophyte of Mnium hornum, a moss.
      • Dominant gametophyte (gametophytic).
        In liverworts, mosses and hornworts, the dominant form is the haploid gametophyte. The diploid sporophyte is not capable of an independent existence, gaining most of its nutrition from the parent gametophyte, and having no chlorophyll when mature.
        Sporophyte of Lomaria discolor, a fern.
      • Dominant sporophyte (sporophytic).
        In ferns, both the sporophyte and the gametophyte are capable of living independently, but the dominant form is the diploid sporophyte. The haploid gametophyte is much smaller and simpler in structure. In seed plants, the gametophyte is even more reduced (at the minimum to only three cells), gaining all its nutrition from the sporophyte. The extreme reduction in the size of the gametophyte and its retention within the sporophyte means that when applied to seed plants the term 'alternation of generations' is somewhat misleading: "[s]porophyte and gametophyte effectively function as a single organism". Some authors have preferred the term 'alternation of phases'.
  • Differentiation of the gametes.
    • Both gametes the same (isogamy).
      Like other species of Cladophora, C. callicoma has flagellated gametes which are identical in appearance and ability to move.
    • Gametes of two distinct sizes (anisogamy).
      • Both of similar motility.
        Species of Ulva, the sea lettuce, have gametes which all have two flagella and so are motile. However they are of two sizes: larger 'female' gametes and smaller 'male' gametes.
      • One large and sessile, one small and motile (oogamy). The larger sessile megagametes are eggs (ova), and smaller motile microgametes are sperm (spermatozoa, spermatozoids). The degree of motility of the sperm may be very limited (as in the case of flowering plants) but all are able to move towards the sessile eggs. When (as is almost always the case) the sperm and eggs are produced in different kinds of gametangia, the sperm-producing ones are called antheridia (singular antheridium) and the egg-producing ones archegonia (singular archegonium).
        Gametophyte of Pellia epiphylla with sporophytes growing from the remains of archegonia.
        • Antheridia and archegonia occur on the same gametophyte, which is then called monoicous. (Many sources, including those concerned with bryophytes, use the term 'monoecious' for this situation and 'dioecious' for the opposite. Here 'monoecious' and 'dioecious' are used only for sporophytes.)
          The liverwort Pellia epiphylla has the gametophyte as the dominant generation. It is monoicous: the small reddish sperm-producing antheridia are scattered along the midrib while the egg-producing archegonia grow nearer the tips of divisions of the plant.
        • Antheridia and archegonia occur on different gametophytes, which are then called dioicous.
          The moss Mnium hornum has the gametophyte as the dominant generation. It is dioicous: male plants produce only antheridia in terminal rosettes, female plants produce only archegonia in the form of stalked capsules. Seed plant gametophytes are also dioicous. However, the parent sporophyte may be monoecious, producing both male and female gametophytes or dioecious, producing gametophytes of one gender only. Seed plant gametophytes are extremely reduced in size; the archegonium consists only of a small number of cells, and the entire male gametophyte may be represented by only two cells.
  • Differentiation of the spores.
    • All spores the same size (homospory or isospory).
      Horsetails (species of Equisetum) have spores which are all of the same size.
    • Spores of two distinct sizes (heterospory or anisospory): larger megaspores and smaller microspores. When the two kinds of spore are produced in different kinds of sporangia, these are called megasporangia and microsporangia. A megaspore often (but not always) develops at the expense of the other three cells resulting from meiosis, which abort.
      • Megasporangia and microsporangia occur on the same sporophyte, which is then called monoecious.
        Most flowering plants fall into this category. Thus the flower of a lily contains six stamens (the microsporangia) which produce microspores which develop into pollen grains (the microgametophytes), and three fused carpels which produce integumented megasporangia (ovules) each of which produces a megaspore which develops inside the megasporangium to produce the megagametophyte. In other plants, such as hazel, some flowers have only stamens, others only carpels, but the same plant (i.e. sporophyte) has both kinds of flower and so is monoecious.
        Flowers of European holly, a dioecious species: male above, female below (leaves cut to show flowers more clearly)
      • Megasporangia and microsporangia occur on different sporophytes, which are then called dioecious.
        An individual tree of the European holly (Ilex aquifolium) produces either 'male' flowers which have only functional stamens (microsporangia) producing microspores which develop into pollen grains (microgametophytes) or 'female' flowers which have only functional carpels producing integumented megasporangia (ovules) that contain a megaspore that develops into a multicellular megagametophyte.

There are some correlations between these variations, but they are just that, correlations, and not absolute. For example, in flowering plants, microspores ultimately produce microgametes (sperm) and megaspores ultimately produce megagametes (eggs). However, in ferns and their allies there are groups with undifferentiated spores but differentiated gametophytes. For example, the fern Ceratopteris thalictrioides has spores of only one kind, which vary continuously in size. Smaller spores tend to germinate into gametophytes which produce only sperm-producing antheridia.

A complex life cycle

Alternation of generations in a species which is heteromorphic, sporophytic, oogametic, dioicous, heterosporic and dioecious

Plant life cycles can be complex. Alternation of generations can take place in plants which are at once heteromorphic, sporophytic, oogametic, dioicous, heterosporic and dioecious, such as in a willow tree (as most species of the genus Salix are dioecious). The processes involved are:

  • An immobile egg, contained in the archegonium, fuses with a mobile sperm, released from an antheridium. The resulting zygote is either 'male' or 'female'.
    • A 'male' zygote develops by mitosis into a microsporophyte, which at maturity produces one or more microsporangia. Microspores develop within the microsporangium by meiosis.
      In a willow (like all seed plants) the zygote first develops into an embryo microsporophyte within the ovule (a megasporangium enclosed in one or more protective layers of tissue known as integument). At maturity, these structures become the seed. Later the seed is shed, germinates and grows into a mature tree. A 'male' willow tree (a microsporophyte) produces flowers with only stamens, the anthers of which are the microsporangia.
    • Microspores germinate producing microgametophytes; at maturity one or more antheridia are produced. Sperm develop within the antheridia.
      In a willow, microspores are not liberated from the anther (the microsporangium), but develop into pollen grains (microgametophytes) within it. The whole pollen grain is moved (e.g. by an insect or by the wind) to an ovule (megagametophyte), where a sperm is produced which moves down a pollen tube to reach the egg.
    • A 'female' zygote develops by mitosis into a megasporophyte, which at maturity produces one or more megasporangia. Megaspores develop within the megasporangium; typically one of the four spores produced by meiosis gains bulk at the expense of the remaining three, which disappear.
      'Female' willow trees (megasporophytes) produce flowers with only carpels (modified leaves that bear the megasporangia).
    • Megaspores germinate producing megagametophytes; at maturity one or more archegonia are produced. Eggs develop within the archegonia.
      The carpels of a willow produce ovules, megasporangia enclosed in integuments. Within each ovule, a megaspore develops by mitosis into a megagametophyte. An archegonium develops within the megagametophyte and produces an egg. The whole of the gametophytic 'generation' remains within the protection of the sporophyte except for pollen grains (which have been reduced to just three cells contained within the microspore wall).

Life cycles of different plant groups

The term "plants" is taken here to mean the Archaeplastida, i.e. the glaucophytes, red and green algae and land plants.

Alternation of generations occurs in almost all multicellular red and green algae, both freshwater forms (such as Cladophora) and seaweeds (such as Ulva). In most, the generations are homomorphic (isomorphic) and free-living. Some species of red algae have a complex triphasic alternation of generations, in which there is a gametophyte phase and two distinct sporophyte phases. For further information, see Red algae: Reproduction.

Land plants all have heteromorphic (anisomorphic) alternation of generations, in which the sporophyte and gametophyte are distinctly different. All bryophytes, i.e. liverworts, mosses and hornworts, have the gametophyte generation as the most conspicuous. As an illustration, consider a monoicous moss. Antheridia and archegonia develop on the mature plant (the gametophyte). In the presence of water, the biflagellate sperm from the antheridia swim to the archegonia and fertilisation occurs, leading to the production of a diploid sporophyte. The sporophyte grows up from the archegonium. Its body comprises a long stalk topped by a capsule within which spore-producing cells undergo meiosis to form haploid spores. Most mosses rely on the wind to disperse these spores, although Splachnum sphaericum is entomophilous, recruiting insects to disperse its spores.

The life cycle of ferns and their allies, including clubmosses and horsetails, the conspicuous plant observed in the field is the diploid sporophyte. The haploid spores develop in sori on the underside of the fronds and are dispersed by the wind (or in some cases, by floating on water). If conditions are right, a spore will germinate and grow into a rather inconspicuous plant body called a prothallus. The haploid prothallus does not resemble the sporophyte, and as such ferns and their allies have a heteromorphic alternation of generations. The prothallus is short-lived, but carries out sexual reproduction, producing the diploid zygote that then grows out of the prothallus as the sporophyte.

In the spermatophytes, the seed plants, the sporophyte is the dominant multicellular phase; the gametophytes are strongly reduced in size and very different in morphology. The entire gametophyte generation, with the sole exception of pollen grains (microgametophytes), is contained within the sporophyte. The life cycle of a dioecious flowering plant (angiosperm), the willow, has been outlined in some detail in an earlier section (A complex life cycle). The life cycle of a gymnosperm is similar. However, flowering plants have in addition a phenomenon called 'double fertilization'. In the process of double fertilization, two sperm nuclei from a pollen grain (the microgametophyte), rather than a single sperm, enter the archegonium of the megagametophyte; one fuses with the egg nucleus to form the zygote, the other fuses with two other nuclei of the gametophyte to form 'endosperm', which nourishes the developing embryo.

Evolution of the dominant diploid phase

It has been proposed that the basis for the emergence of the diploid phase of the life cycle (sporophyte) as the dominant phase (e.g. as in vascular plants) is that diploidy allows masking of the expression of deleterious mutations through genetic complementation. Thus if one of the parental genomes in the diploid cells contained mutations leading to defects in one or more gene products, these deficiencies could be compensated for by the other parental genome (which nevertheless may have its own defects in other genes). As the diploid phase was becoming predominant, the masking effect likely allowed genome size, and hence information content, to increase without the constraint of having to improve accuracy of DNA replication. The opportunity to increase information content at low cost was advantageous because it permitted new adaptations to be encoded. This view has been challenged, with evidence showing that selection is no more effective in the haploid than in the diploid phases of the lifecycle of mosses and angiosperms.

Similar processes in other organisms

Rhizaria

Life cycle of Foraminifera showing alternation of generations

Some organisms currently classified in the clade Rhizaria and thus not plants in the sense used here, exhibit alternation of generations. Most Foraminifera undergo a heteromorphic alternation of generations between haploid gamont and diploid agamont forms. The diploid form is typically much larger than the haploid form; these forms are known as the microsphere and megalosphere, respectively.

Fungi

Fungal mycelia are typically haploid. When mycelia of different mating types meet, they produce two multinucleate ball-shaped cells, which join via a "mating bridge". Nuclei move from one mycelium into the other, forming a heterokaryon (meaning "different nuclei"). This process is called plasmogamy. Actual fusion to form diploid nuclei is called karyogamy, and may not occur until sporangia are formed. Karogamy produces a diploid zygote, which is a short-lived sporophyte that soon undergoes meiosis to form haploid spores. When the spores germinate, they develop into new mycelia.

Slime moulds

The life cycle of slime moulds is very similar to that of fungi. Haploid spores germinate to form swarm cells or myxamoebae. These fuse in a process referred to as plasmogamy and karyogamy to form a diploid zygote. The zygote develops into a plasmodium, and the mature plasmodium produces, depending on the species, one to many fruiting bodies containing haploid spores.

Animals

Alternation between a multicellular diploid and a multicellular haploid generation is never encountered in animals. In some animals, there is an alternation between parthenogenic and sexually reproductive phases (heterogamy), for instance in salps and doliolids (class Thaliacea). Both phases are diploid. This has sometimes been called "alternation of generations", but is quite different. In some other animals, such as hymenopterans, males are haploid and females diploid, but this is always the case rather than there being an alternation between distinct generations.

Meiosis

From Wikipedia, the free encyclopedia
In meiosis, the chromosomes duplicate (during interphase) and homologous chromosomes exchange genetic information (chromosomal crossover) during the first division, called meiosis I. The daughter cells divide again in meiosis II, splitting up sister chromatids to form haploid gametes. Two gametes fuse during fertilization, forming a diploid cell (zygote) with a complete set of paired chromosomes.

Meiosis; from Ancient Greek μείωσις (meíōsis) 'lessening', since it is a reductional division) is a special type of cell division of germ cells in sexually-reproducing organisms that produces the gametes, such as sperm or egg cells. It involves two rounds of division that ultimately result in four cells with only one copy of each chromosome (haploid). Additionally, prior to the division, genetic material from the paternal and maternal copies of each chromosome is crossed over, creating new combinations of code on each chromosome. Later on, during fertilisation, the haploid cells produced by meiosis from a male and a female will fuse to create a cell with two copies of each chromosome again, the zygote.

Errors in meiosis resulting in aneuploidy (an abnormal number of chromosomes) are the leading known cause of miscarriage and the most frequent genetic cause of developmental disabilities.

In meiosis, DNA replication is followed by two rounds of cell division to produce four daughter cells, each with half the number of chromosomes as the original parent cell. The two meiotic divisions are known as meiosis I and meiosis II. Before meiosis begins, during S phase of the cell cycle, the DNA of each chromosome is replicated so that it consists of two identical sister chromatids, which remain held together through sister chromatid cohesion. This S-phase can be referred to as "premeiotic S-phase" or "meiotic S-phase". Immediately following DNA replication, meiotic cells enter a prolonged G2-like stage known as meiotic prophase. During this time, homologous chromosomes pair with each other and undergo genetic recombination, a programmed process in which DNA may be cut and then repaired, which allows them to exchange some of their genetic information. A subset of recombination events results in crossovers, which create physical links known as chiasmata (singular: chiasma, for the Greek letter Chi (Χ)) between the homologous chromosomes. In most organisms, these links can help direct each pair of homologous chromosomes to segregate away from each other during meiosis I, resulting in two haploid cells that have half the number of chromosomes as the parent cell.

During meiosis II, the cohesion between sister chromatids is released and they segregate from one another, as during mitosis. In some cases, all four of the meiotic products form gametes such as sperm, spores or pollen. In female animals, three of the four meiotic products are typically eliminated by extrusion into polar bodies, and only one cell develops to produce an ovum. Because the number of chromosomes is halved during meiosis, gametes can fuse (i.e. fertilization) to form a diploid zygote that contains two copies of each chromosome, one from each parent. Thus, alternating cycles of meiosis and fertilization enable sexual reproduction, with successive generations maintaining the same number of chromosomes. For example, diploid human cells contain 23 pairs of chromosomes including 1 pair of sex chromosomes (46 total), half of maternal origin and half of paternal origin. Meiosis produces haploid gametes (ova or sperm) that contain one set of 23 chromosomes. When two gametes (an egg and a sperm) fuse, the resulting zygote is once again diploid, with the mother and father each contributing 23 chromosomes. This same pattern, but not the same number of chromosomes, occurs in all organisms that utilize meiosis.

Meiosis occurs in all sexually-reproducing single-celled and multicellular organisms (which are all eukaryotes), including animals, plants and fungi. It is an essential process for oogenesis and spermatogenesis.

Overview

Although the process of meiosis is related to the more general cell division process of mitosis, it differs in two important respects:

recombination meiosis shuffles the genes between the two chromosomes in each pair (one received from each parent), producing recombinant chromosomes with unique genetic combinations in every gamete
mitosis occurs only if needed to repair DNA damage;

usually occurs between identical sister chromatids and does not result in genetic changes

 
chromosome number (ploidy) meiosis produces four genetically unique cells, each with half the number of chromosomes as in the parent
mitosis produces two genetically identical cells, each with the same number of chromosomes as in the parent

Meiosis begins with a diploid cell, which contains two copies of each chromosome, termed homologs. First, the cell undergoes DNA replication, so each homolog now consists of two identical sister chromatids. Then each set of homologs pair with each other and exchange genetic information by homologous recombination often leading to physical connections (crossovers) between the homologs. In the first meiotic division, the homologs are segregated to separate daughter cells by the spindle apparatus. The cells then proceed to a second division without an intervening round of DNA replication. The sister chromatids are segregated to separate daughter cells to produce a total of four haploid cells. Female animals employ a slight variation on this pattern and produce one large ovum and two small polar bodies. Because of recombination, an individual chromatid can consist of a new combination of maternal and paternal genetic information, resulting in offspring that are genetically distinct from either parent. Furthermore, an individual gamete can include an assortment of maternal, paternal, and recombinant chromatids. This genetic diversity resulting from sexual reproduction contributes to the variation in traits upon which natural selection can act.

Meiosis uses many of the same mechanisms as mitosis, the type of cell division used by eukaryotes to divide one cell into two identical daughter cells. In some plants, fungi, and protists meiosis results in the formation of spores: haploid cells that can divide vegetatively without undergoing fertilization. Some eukaryotes, like bdelloid rotifers, do not have the ability to carry out meiosis and have acquired the ability to reproduce by parthenogenesis.

Meiosis does not occur in archaea or bacteria, which generally reproduce asexually via binary fission. However, a "sexual" process known as horizontal gene transfer involves the transfer of DNA from one bacterium or archaeon to another and recombination of these DNA molecules of different parental origin.

History

Meiosis was discovered and described for the first time in sea urchin eggs in 1876 by the German biologist Oscar Hertwig. It was described again in 1883, at the level of chromosomes, by the Belgian zoologist Edouard Van Beneden, in Ascaris roundworm eggs. The significance of meiosis for reproduction and inheritance, however, was described only in 1890 by German biologist August Weismann, who noted that two cell divisions were necessary to transform one diploid cell into four haploid cells if the number of chromosomes had to be maintained. In 1911, the American geneticist Thomas Hunt Morgan detected crossovers in meiosis in the fruit fly Drosophila melanogaster, which helped to establish that genetic traits are transmitted on chromosomes.

The term "meiosis" is derived from the Greek word μείωσις, meaning 'lessening'. It was introduced to biology by J.B. Farmer and J.E.S. Moore in 1905, using the idiosyncratic rendering "maiosis":

We propose to apply the terms Maiosis or Maiotic phase to cover the whole series of nuclear changes included in the two divisions that were designated as Heterotype and Homotype by Flemming.

The spelling was changed to "meiosis" by Koernicke (1905) and by Pantel and De Sinety (1906) to follow the usual conventions for transliterating Greek.

Phases

Meiosis is divided into meiosis I and meiosis II which are further divided into Karyokinesis I, Cytokinesis I, Karyokinesis II, and Cytokinesis II, respectively. The preparatory steps that lead up to meiosis are identical in pattern and name to interphase of the mitotic cell cycle. Interphase is divided into three phases:

  • Growth 1 (G1) phase: In this very active phase, the cell synthesizes its vast array of proteins, including the enzymes and structural proteins it will need for growth. In G1, each of the chromosomes consists of a single linear molecule of DNA.
  • Synthesis (S) phase: The genetic material is replicated; each of the cell's chromosomes duplicates to become two identical sister chromatids attached at a centromere. This replication does not change the ploidy of the cell since the centromere number remains the same. The identical sister chromatids have not yet condensed into the densely packaged chromosomes visible with the light microscope. This will take place during prophase I in meiosis.
  • Growth 2 (G2) phase: G2 phase as seen before mitosis is not present in meiosis. Meiotic prophase corresponds most closely to the G2 phase of the mitotic cell cycle.

Interphase is followed by meiosis I and then meiosis II. Meiosis I separates replicated homologous chromosomes, each still made up of two sister chromatids, into two daughter cells, thus reducing the chromosome number by half. During meiosis II, sister chromatids decouple and the resultant daughter chromosomes are segregated into four daughter cells. For diploid organisms, the daughter cells resulting from meiosis are haploid and contain only one copy of each chromosome. In some species, cells enter a resting phase known as interkinesis between meiosis I and meiosis II.

Meiosis I and II are each divided into prophase, metaphase, anaphase, and telophase stages, similar in purpose to their analogous subphases in the mitotic cell cycle. Therefore, meiosis includes the stages of meiosis I (prophase I, metaphase I, anaphase I, telophase I) and meiosis II (prophase II, metaphase II, anaphase II, telophase II).

Diagram of the meiotic phases

During meiosis, specific genes are more highly transcribed. In addition to strong meiotic stage-specific expression of mRNA, there are also pervasive translational controls (e.g. selective usage of preformed mRNA), regulating the ultimate meiotic stage-specific protein expression of genes during meiosis. Thus, both transcriptional and translational controls determine the broad restructuring of meiotic cells needed to carry out meiosis.

Meiosis I

Meiosis I segregates homologous chromosomes, which are joined as tetrads (2n, 4c), producing two haploid cells (n chromosomes, 23 in humans) which each contain chromatid pairs (1n, 2c). Because the ploidy is reduced from diploid to haploid, meiosis I is referred to as a reductional division. Meiosis II is an equational division analogous to mitosis, in which the sister chromatids are segregated, creating four haploid daughter cells (1n, 1c).

Meiosis Prophase I in mice. In Leptotene (L) the axial elements (stained by SYCP3) begin to form. In Zygotene (Z) the transverse elements (SYCP1) and central elements of the synaptonemal complex are partially installed (appearing as yellow as they overlap with SYCP3). In Pachytene (P) it's fully installed except on the sex chromosomes. In Diplotene (D) it disassembles revealing chiasmata. CREST marks the centromeres.
Schematic of the synaptonemal complex at different stages of prophase I and the chromosomes arranged as a linear array of loops.

Prophase I

Prophase I is by far the longest phase of meiosis (lasting 13 out of 14 days in mice). During prophase I, homologous maternal and paternal chromosomes pair, synapse, and exchange genetic information (by homologous recombination), forming at least one crossover per chromosome. These crossovers become visible as chiasmata (plural; singular chiasma). This process facilitates stable pairing between homologous chromosomes and hence enables accurate segregation of the chromosomes at the first meiotic division. The paired and replicated chromosomes are called bivalents (two chromosomes) or tetrads (four chromatids), with one chromosome coming from each parent. Prophase I is divided into a series of substages which are named according to the appearance of chromosomes.

Leptotene

The first stage of prophase I is the leptotene stage, also known as leptonema, from Greek words meaning "thin threads". In this stage of prophase I, individual chromosomes—each consisting of two replicated sister chromatids—become "individualized" to form visible strands within the nucleus. The chromosomes each form a linear array of loops mediated by cohesin, and the lateral elements of the synaptonemal complex assemble forming an "axial element" from which the loops emanate. Recombination is initiated in this stage by the enzyme SPO11 which creates programmed double strand breaks (around 300 per meiosis in mice). This process generates single stranded DNA filaments coated by RAD51 and DMC1 which invade the homologous chromosomes, forming inter-axis bridges, and resulting in the pairing/co-alignment of homologues (to a distance of ~400 nm in mice).

Zygotene

Leptotene is followed by the zygotene stage, also known as zygonema, from Greek words meaning "paired threads", which in some organisms is also called the bouquet stage because of the way the telomeres cluster at one end of the nucleus. In this stage the homologous chromosomes become much more closely (~100 nm) and stably paired (a process called synapsis) mediated by the installation of the transverse and central elements of the synaptonemal complex. Synapsis is thought to occur in a zipper-like fashion starting from a recombination nodule. The paired chromosomes are called bivalent or tetrad chromosomes.

Pachytene

The pachytene stage (/ˈpækɪtn/ PAK-i-teen), also known as pachynema, from Greek words meaning "thick threads". is the stage at which all autosomal chromosomes have synapsed. In this stage homologous recombination, including chromosomal crossover (crossing over), is completed through the repair of the double strand breaks formed in leptotene. Most breaks are repaired without forming crossovers resulting in gene conversion. However, a subset of breaks (at least one per chromosome) form crossovers between non-sister (homologous) chromosomes resulting in the exchange of genetic information. Sex chromosomes, however, are not wholly identical, and only exchange information over a small region of homology called the pseudoautosomal region. The exchange of information between the homologous chromatids results in a recombination of information; each chromosome has the complete set of information it had before, and there are no gaps formed as a result of the process. Because the chromosomes cannot be distinguished in the synaptonemal complex, the actual act of crossing over is not perceivable through an ordinary light microscope, and chiasmata are not visible until the next stage.

Diplotene

During the diplotene stage, also known as diplonema, from Greek words meaning "two threads", the synaptonemal complex disassembles and homologous chromosomes separate from one another a little. However, the homologous chromosomes of each bivalent remain tightly bound at chiasmata, the regions where crossing-over occurred. The chiasmata remain on the chromosomes until they are severed at the transition to anaphase I to allow homologous chromosomes to move to opposite poles of the cell.

In human fetal oogenesis, all developing oocytes develop to this stage and are arrested in prophase I before birth. This suspended state is referred to as the dictyotene stage or dictyate. It lasts until meiosis is resumed to prepare the oocyte for ovulation, which happens at puberty or even later.

Diakinesis

Chromosomes condense further during the diakinesis stage, from Greek words meaning "moving through". This is the first point in meiosis where the four parts of the tetrads are actually visible. Sites of crossing over entangle together, effectively overlapping, making chiasmata clearly visible. Other than this observation, the rest of the stage closely resembles prometaphase of mitosis; the nucleoli disappear, the nuclear membrane disintegrates into vesicles, and the meiotic spindle begins to form.

Meiotic spindle formation

Unlike mitotic cells, human and mouse oocytes do not have centrosomes to produce the meiotic spindle. In mice, approximately 80 MicroTubule Organizing Centers (MTOCs) form a sphere in the ooplasm and begin to nucleate microtubules that reach out towards chromosomes, attaching to the chromosomes at the kinetochore. Over time the MTOCs merge until two poles have formed, generating a barrel shaped spindle. In human oocytes spindle microtubule nucleation begins on the chromosomes, forming an aster that eventually expands to surround the chromosomes. Chromosomes then slide along the microtubules towards the equator of the spindle, at which point the chromosome kinetochores form end-on attachments to microtubules.

Metaphase I

Homologous pairs move together along the metaphase plate: As kinetochore microtubules from both spindle poles attach to their respective kinetochores, the paired homologous chromosomes align along an equatorial plane that bisects the spindle, due to continuous counterbalancing forces exerted on the bivalents by the microtubules emanating from the two kinetochores of homologous chromosomes. This attachment is referred to as a bipolar attachment. The physical basis of the independent assortment of chromosomes is the random orientation of each bivalent along with the metaphase plate, with respect to the orientation of the other bivalents along the same equatorial line. The protein complex cohesin holds sister chromatids together from the time of their replication until anaphase. In mitosis, the force of kinetochore microtubules pulling in opposite directions creates tension. The cell senses this tension and does not progress with anaphase until all the chromosomes are properly bi-oriented. In meiosis, establishing tension ordinarily requires at least one crossover per chromosome pair in addition to cohesin between sister chromatids (see Chromosome segregation).

Anaphase I

Kinetochore microtubules shorten, pulling homologous chromosomes (which each consist of a pair of sister chromatids) to opposite poles. Nonkinetochore microtubules lengthen, pushing the centrosomes farther apart. The cell elongates in preparation for division down the center. Unlike in mitosis, only the cohesin from the chromosome arms is degraded while the cohesin surrounding the centromere remains protected by a protein named Shugoshin (Japanese for "guardian spirit"), what prevents the sister chromatids from separating. This allows the sister chromatids to remain together while homologs are segregated.

Telophase I

The first meiotic division effectively ends when the chromosomes arrive at the poles. Each daughter cell now has half the number of chromosomes but each chromosome consists of a pair of chromatids. The microtubules that make up the spindle network disappear, and a new nuclear membrane surrounds each haploid set. The chromosomes uncoil back into chromatin. Cytokinesis, the pinching of the cell membrane in animal cells or the formation of the cell wall in plant cells, occurs, completing the creation of two daughter cells. However, cytokinesis does not fully complete resulting in "cytoplasmic bridges" which enable the cytoplasm to be shared between daughter cells until the end of meiosis II. Sister chromatids remain attached during telophase I.

Cells may enter a period of rest known as interkinesis or interphase II. No DNA replication occurs during this stage.

Meiosis II

Meiosis II is the second meiotic division, and usually involves equational segregation, or separation of sister chromatids. Mechanically, the process is similar to mitosis, though its genetic results are fundamentally different. The end result is the production of four haploid cells (n chromosomes; 23 in humans) from the two haploid cells (with n chromosomes, each consisting of two sister chromatids) produced in meiosis I. The four main steps of meiosis II are: prophase II, metaphase II, anaphase II, and telophase II.

In prophase II, we see the disappearance of the nucleoli and the nuclear envelope again as well as the shortening and thickening of the chromatids. Centrosomes move to the polar regions and arrange spindle fibers for the second meiotic division.

In metaphase II, the centromeres contain two kinetochores that attach to spindle fibers from the centrosomes at opposite poles. The new equatorial metaphase plate is rotated by 90 degrees when compared to meiosis I, perpendicular to the previous plate.

This is followed by anaphase II, in which the remaining centromeric cohesin, not protected by Shugoshin anymore, is cleaved, allowing the sister chromatids to segregate. The sister chromatids by convention are now called sister chromosomes as they move toward opposing poles.

The process ends with telophase II, which is similar to telophase I, and is marked by decondensation and lengthening of the chromosomes and the disassembly of the spindle. Nuclear envelopes re-form and cleavage or cell plate formation eventually produces a total of four daughter cells, each with a haploid set of chromosomes.

Meiosis is now complete and ends up with four new daughter cells.

Origin and function

The new combinations of DNA created during meiosis are a significant source of genetic variation alongside mutation, resulting in new combinations of alleles, which may be beneficial. Meiosis generates gamete genetic diversity in two ways: (1) Law of Independent Assortment. The independent orientation of homologous chromosome pairs along the metaphase plate during metaphase I and orientation of sister chromatids in metaphase II, this is the subsequent separation of homologs and sister chromatids during anaphase I and II, it allows a random and independent distribution of chromosomes to each daughter cell (and ultimately to gametes); and (2) Crossing Over. The physical exchange of homologous chromosomal regions by homologous recombination during prophase I results in new combinations of genetic information within chromosomes.

Prophase I arrest

Female mammals and birds are born possessing all the oocytes needed for future ovulations, and these oocytes are arrested at the prophase I stage of meiosis. In humans, as an example, oocytes are formed between three and four months of gestation within the fetus and are therefore present at birth. During this prophase I arrested stage (dictyate), which may last for decades, four copies of the genome are present in the oocytes. The arrest of ooctyes at the four genome copy stage was proposed to provide the informational redundancy needed to repair damage in the DNA of the germline. The repair process used appears to involve homologous recombinational repair Prophase I arrested oocytes have a high capability for efficient repair of DNA damage, particularly exogenously induced double-strand breaks. DNA repair capability appears to be a key quality control mechanism in the female germ line and a critical determinant of fertility.

Occurrence

In life cycles

Diplontic life cycle
Haplontic life cycle.

Meiosis occurs in eukaryotic life cycles involving sexual reproduction, consisting of the constant cyclical process of meiosis and fertilization. This takes place alongside normal mitotic cell division. In multicellular organisms, there is an intermediary step between the diploid and haploid transition where the organism grows. At certain stages of the life cycle, germ cells produce gametes. Somatic cells make up the body of the organism and are not involved in gamete production.

Cycling meiosis and fertilization events produces a series of transitions back and forth between alternating haploid and diploid states. The organism phase of the life cycle can occur either during the diploid state (diplontic life cycle), during the haploid state (haplontic life cycle), or both (haplodiplontic life cycle, in which there are two distinct organism phases, one during the haploid state and the other during the diploid state). In this sense there are three types of life cycles that utilize sexual reproduction, differentiated by the location of the organism phase(s).

In the diplontic life cycle (with pre-gametic meiosis), of which humans are a part, the organism is diploid, grown from a diploid cell called the zygote. The organism's diploid germ-line stem cells undergo meiosis to create haploid gametes (the spermatozoa for males and ova for females), which fertilize to form the zygote. The diploid zygote undergoes repeated cellular division by mitosis to grow into the organism.

In the haplontic life cycle (with post-zygotic meiosis), the organism is haploid instead, spawned by the proliferation and differentiation of a single haploid cell called the gamete. Two organisms of opposing sex contribute their haploid gametes to form a diploid zygote. The zygote undergoes meiosis immediately, creating four haploid cells. These cells undergo mitosis to create the organism. Many fungi and many protozoa utilize the haplontic life cycle.

Finally, in the haplodiplontic life cycle (with sporic or intermediate meiosis), the living organism alternates between haploid and diploid states. Consequently, this cycle is also known as the alternation of generations. The diploid organism's germ-line cells undergo meiosis to produce spores. The spores proliferate by mitosis, growing into a haploid organism. The haploid organism's gamete then combines with another haploid organism's gamete, creating the zygote. The zygote undergoes repeated mitosis and differentiation to become a diploid organism again. The haplodiplontic life cycle can be considered a fusion of the diplontic and haplontic life cycles.

In plants and animals

Overview of chromatides' and chromosomes' distribution within the mitotic and meiotic cycle of a male human cell

Meiosis occurs in all animals and plants. The end result, the production of gametes with half the number of chromosomes as the parent cell, is the same, but the detailed process is different. In animals, meiosis produces gametes directly. In land plants and some algae, there is an alternation of generations such that meiosis in the diploid sporophyte generation produces haploid spores. These spores multiply by mitosis, developing into the haploid gametophyte generation, which then gives rise to gametes directly (i.e. without further meiosis). Errors in meiosis in plants can result in viable polyploid offspring, which can form broad species complexes (such as in Crepis, which frequently produce polyploid offspring).

In both animals and plants, the final stage is for the gametes to fuse, restoring the original number of chromosomes.

In mammals

In females, meiosis occurs in cells known as oocytes (singular: oocyte). Each primary oocyte divides twice in meiosis, unequally in each case. The first division produces a daughter cell, and a much smaller polar body which may or may not undergo a second division. In meiosis II, division of the daughter cell produces a second polar body, and a single haploid cell, which enlarges to become an ovum. Therefore, in females each primary oocyte that undergoes meiosis results in one mature ovum and two or three polar bodies.

There are pauses during meiosis in females. Maturing oocytes are arrested in prophase I of meiosis I and lie dormant within a protective shell of somatic cells called the follicle. At the beginning of each menstrual cycle, FSH secretion from the anterior pituitary stimulates a few follicles to mature in a process known as folliculogenesis. During this process, the maturing oocytes resume meiosis and continue until metaphase II of meiosis II, where they are again arrested just before ovulation. If these oocytes are fertilized by sperm, they will resume and complete meiosis. During folliculogenesis in humans, usually one follicle becomes dominant while the others undergo atresia. The process of meiosis in females occurs during oogenesis, and differs from the typical meiosis in that it features a long period of meiotic arrest known as the dictyate stage and lacks the assistance of centrosomes.

In males, meiosis occurs during spermatogenesis in the seminiferous tubules of the testicles. Meiosis during spermatogenesis is specific to a type of cell called spermatocytes, which will later mature to become spermatozoa. Meiosis of primordial germ cells happens at the time of puberty, much later than in females. Tissues of the male testis suppress meiosis by degrading retinoic acid, proposed to be a stimulator of meiosis. This is overcome at puberty when cells within seminiferous tubules called Sertoli cells start making their own retinoic acid. Sensitivity to retinoic acid is also adjusted by proteins called nanos and DAZL. Genetic loss-of-function studies on retinoic acid-generating enzymes have shown that retinoic acid is required postnatally to stimulate spermatogonia differentiation which results several days later in spermatocytes undergoing meiosis, however retinoic acid is not required during the time when meiosis initiates.

In female mammals, meiosis begins immediately after primordial germ cells migrate to the ovary in the embryo. Some studies suggest that retinoic acid derived from the primitive kidney (mesonephros) stimulates meiosis in embryonic ovarian oogonia and that tissues of the embryonic male testis suppress meiosis by degrading retinoic acid. However, genetic loss-of-function studies on retinoic acid-generating enzymes have shown that retinoic acid is not required for initiation of either female meiosis which occurs during embryogenesis or male meiosis which initiates postnatally.

Flagellates

While the majority of eukaryotes have a two-divisional meiosis (though sometimes achiasmatic), a very rare form, one-divisional meiosis, occurs in some flagellates (parabasalids and oxymonads) from the gut of the wood-feeding cockroach Cryptocercus.

Role in human genetics and disease

Recombination among the 23 pairs of human chromosomes is responsible for redistributing not just the actual chromosomes, but also pieces of each of them. There is also an estimated 1.6-fold more recombination in females relative to males. In addition, average, female recombination is higher at the centromeres and male recombination is higher at the telomeres. On average, 1 million bp (1 Mb) correspond to 1 cMorgan (cm = 1% recombination frequency). The frequency of cross-overs remain uncertain. In yeast, mouse and human, it has been estimated that ≥200 double-strand breaks (DSBs) are formed per meiotic cell. However, only a subset of DSBs (~5–30% depending on the organism), go on to produce crossovers, which would result in only 1-2 cross-overs per human chromosome.

Nondisjunction

The normal separation of chromosomes in meiosis I or sister chromatids in meiosis II is termed disjunction. When the segregation is not normal, it is called nondisjunction. This results in the production of gametes which have either too many or too few of a particular chromosome, and is a common mechanism for trisomy or monosomy. Nondisjunction can occur in the meiosis I or meiosis II, phases of cellular reproduction, or during mitosis.

Most monosomic and trisomic human embryos are not viable, but some aneuploidies can be tolerated, such as trisomy for the smallest chromosome, chromosome 21. Phenotypes of these aneuploidies range from severe developmental disorders to asymptomatic. Medical conditions include but are not limited to:

The probability of nondisjunction in human oocytes increases with increasing maternal age, presumably due to loss of cohesin over time.

Comparison to mitosis

In order to understand meiosis, a comparison to mitosis is helpful. The table below shows the differences between meiosis and mitosis.


Meiosis Mitosis
End result Normally four cells, each with half the number of chromosomes as the parent Two cells, having the same number of chromosomes as the parent
Function Production of gametes (sex cells) in sexually reproducing eukaryotes with diplont life cycle Cellular reproduction, growth, repair, asexual reproduction
Where does it happen? Almost all eukaryotes (animals, plants, fungi, and protists);
In gonads, before gametes (in diplontic life cycles);
After zygotes (in haplontic);
Before spores (in haplodiplontic)
All proliferating cells in all eukaryotes
Steps Prophase I, Metaphase I, Anaphase I, Telophase I,
Prophase II, Metaphase II, Anaphase II, Telophase II
Prophase, Prometaphase, Metaphase, Anaphase, Telophase
Genetically same as parent? No Yes
Crossing over happens? Yes, normally occurs between each pair of homologous chromosomes Very rarely
Pairing of homologous chromosomes? Yes No
Cytokinesis Occurs in Telophase I and Telophase II Occurs in Telophase
Centromeres split Does not occur in Anaphase I, but occurs in Anaphase II Occurs in Anaphase

Molecular regulation

How a cell proceeds to meiotic division in meiotic cell division is not well known. Maturation promoting factor (MPF) seemingly have role in frog Oocyte meiosis. In the fungus S. pombe. there is a role of MeiRNA binding protein for entry to meiotic cell division.

It has been suggested that Yeast CEP1 gene product, that binds centromeric region CDE1, may play a role in chromosome pairing during meiosis-I.

Meiotic recombination is mediated through double stranded break, which is catalyzed by Spo11 protein. Also Mre11, Sae2 and Exo1 play role in breakage and recombination. After the breakage happen, recombination take place which is typically homologous. The recombination may go through either a double Holliday junction (dHJ) pathway or synthesis-dependent strand annealing (SDSA). (The second one gives to noncrossover product).

Seemingly there are checkpoints for meiotic cell division too. In S. pombe, Rad proteins, S. pombe Mek1 (with FHA kinase domain), Cdc25, Cdc2 and unknown factor is thought to form a checkpoint.

In vertebrate oogenesis, maintained by cytostatic factor (CSF) has role in switching into meiosis-II.

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