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Saturday, May 1, 2021

Fossil

From Wikipedia, the free encyclopedia

A fossil (from Classical Latin: fossilis, literally "obtained by digging") is any preserved remains, impression, or trace of any once-living thing from a past geological age. Examples include bones, shells, exoskeletons, stone imprints of animals or microbes, objects preserved in amber, hair, petrified wood, oil, coal, and DNA remnants. The totality of fossils is known as the fossil record.

Paleontology is the study of fossils: their age, method of formation, and evolutionary significance. Specimens are usually considered to be fossils if they are over 10,000 years old. The oldest fossils are around 3.48 billion years old to 4.1 billion years old. The observation in the 19th century that certain fossils were associated with certain rock strata led to the recognition of a geological timescale and the relative ages of different fossils. The development of radiometric dating techniques in the early 20th century allowed scientists to quantitatively measure the absolute ages of rocks and the fossils they host.

There are many processes that lead to fossilization, including permineralization, casts and molds, authigenic mineralization, replacement and recrystallization, adpression, carbonization, and bioimmuration.

Fossils vary in size from one-micrometre (1 µm) bacteria to dinosaurs and trees, many meters long and weighing many tons. A fossil normally preserves only a portion of the deceased organism, usually that portion that was partially mineralized during life, such as the bones and teeth of vertebrates, or the chitinous or calcareous exoskeletons of invertebrates. Fossils may also consist of the marks left behind by the organism while it was alive, such as animal tracks or feces (coprolites). These types of fossil are called trace fossils or ichnofossils, as opposed to body fossils. Some fossils are biochemical and are called chemofossils or biosignatures.

Fossilization processes

The process of fossilization varies according to tissue type and external conditions.

Permineralization

Permineralized bryozoan from the Devonian of Wisconsin.

Permineralization is a process of fossilization that occurs when an organism is buried. The empty spaces within an organism (spaces filled with liquid or gas during life) become filled with mineral-rich groundwater. Minerals precipitate from the groundwater, occupying the empty spaces. This process can occur in very small spaces, such as within the cell wall of a plant cell. Small scale permineralization can produce very detailed fossils. For permineralization to occur, the organism must become covered by sediment soon after death, otherwise the remains are destroyed by scavengers or decomposition. The degree to which the remains are decayed when covered determines the later details of the fossil. Some fossils consist only of skeletal remains or teeth; other fossils contain traces of skin, feathers or even soft tissues. This is a form of diagenesis.

Casts and molds

External mold of a bivalve from the Logan Formation, Lower Carboniferous, Ohio

In some cases, the original remains of the organism completely dissolve or are otherwise destroyed. The remaining organism-shaped hole in the rock is called an external mold. If this hole is later filled with other minerals, it is a cast. An endocast, or internal mold, is formed when sediments or minerals fill the internal cavity of an organism, such as the inside of a bivalve or snail or the hollow of a skull.

Authigenic mineralization

This is a special form of cast and mold formation. If the chemistry is right, the organism (or fragment of organism) can act as a nucleus for the precipitation of minerals such as siderite, resulting in a nodule forming around it. If this happens rapidly before significant decay to the organic tissue, very fine three-dimensional morphological detail can be preserved. Nodules from the Carboniferous Mazon Creek fossil beds of Illinois, USA, are among the best documented examples of such mineralization.

Replacement and recrystallization

Silicified (replaced with silica) fossils from the Road Canyon Formation (Middle Permian of Texas)
 
Recrystallized scleractinian coral (aragonite to calcite) from the Jurassic of southern Israel

Replacement occurs when the shell, bone, or other tissue is replaced with another mineral. In some cases mineral replacement of the original shell occurs so gradually and at such fine scales that microstructural features are preserved despite the total loss of original material. A shell is said to be recrystallized when the original skeletal compounds are still present but in a different crystal form, as from aragonite to calcite.

Adpression (compression-impression)

Compression fossils, such as those of fossil ferns, are the result of chemical reduction of the complex organic molecules composing the organism's tissues. In this case the fossil consists of original material, albeit in a geochemically altered state. This chemical change is an expression of diagenesis. Often what remains is a carbonaceous film known as a phytoleim, in which case the fossil is known as a compression. Often, however, the phytoleim is lost and all that remains is an impression of the organism in the rock—an impression fossil. In many cases, however, compressions and impressions occur together. For instance, when the rock is broken open, the phytoleim will often be attached to one part (compression), whereas the counterpart will just be an impression. For this reason, one term covers the two modes of preservation: adpression.

Soft tissue, cell and molecular preservation

Because of their antiquity, an unexpected exception to the alteration of an organism's tissues by chemical reduction of the complex organic molecules during fossilization has been the discovery of soft tissue in dinosaur fossils, including blood vessels, and the isolation of proteins and evidence for DNA fragments. In 2014, Mary Schweitzer and her colleagues reported the presence of iron particles (goethite-aFeO(OH)) associated with soft tissues recovered from dinosaur fossils. Based on various experiments that studied the interaction of iron in haemoglobin with blood vessel tissue they proposed that solution hypoxia coupled with iron chelation enhances the stability and preservation of soft tissue and provides the basis for an explanation for the unforeseen preservation of fossil soft tissues. However, a slightly older study based on eight taxa ranging in time from the Devonian to the Jurassic found that reasonably well-preserved fibrils that probably represent collagen were preserved in all these fossils and that the quality of preservation depended mostly on the arrangement of the collagen fibers, with tight packing favoring good preservation. There seemed to be no correlation between geological age and quality of preservation, within that timeframe.

Carbonization and coalification

Fossils that are carbonized or coalified consist of the organic remains which have been reduced primarily to the chemical element carbon. Carbonized fossils consist of a thin film which forms a silhouette of the original organism, and the original organic remains were typically soft tissues. Coalified fossils consist primarily of coal, and the original organic remains were typically woody in composition.

Bioimmuration

The star-shaped holes (Catellocaula vallata) in this Upper Ordovician bryozoan represent a soft-bodied organism preserved by bioimmuration in the bryozoan skeleton.

Bioimmuration occurs when a skeletal organism overgrows or otherwise subsumes another organism, preserving the latter, or an impression of it, within the skeleton. Usually it is a sessile skeletal organism, such as a bryozoan or an oyster, which grows along a substrate, covering other sessile sclerobionts. Sometimes the bioimmured organism is soft-bodied and is then preserved in negative relief as a kind of external mold. There are also cases where an organism settles on top of a living skeletal organism that grows upwards, preserving the settler in its skeleton. Bioimmuration is known in the fossil record from the Ordovician to the Recent.

Types

Examples of index fossils

Index

Index fossils (also known as guide fossils, indicator fossils or zone fossils) are fossils used to define and identify geologic periods (or faunal stages). They work on the premise that, although different sediments may look different depending on the conditions under which they were deposited, they may include the remains of the same species of fossil. The shorter the species' time range, the more precisely different sediments can be correlated, and so rapidly evolving species' fossils are particularly valuable. The best index fossils are common, easy to identify at species level and have a broad distribution—otherwise the likelihood of finding and recognizing one in the two sediments is poor.

Trace

Trace fossils consist mainly of tracks and burrows, but also include coprolites (fossil feces) and marks left by feeding. Trace fossils are particularly significant because they represent a data source that is not limited to animals with easily fossilized hard parts, and they reflect animal behaviours. Many traces date from significantly earlier than the body fossils of animals that are thought to have been capable of making them. Whilst exact assignment of trace fossils to their makers is generally impossible, traces may for example provide the earliest physical evidence of the appearance of moderately complex animals (comparable to earthworms).

Coprolites are classified as trace fossils as opposed to body fossils, as they give evidence for the animal's behaviour (in this case, diet) rather than morphology. They were first described by William Buckland in 1829. Prior to this they were known as "fossil fir cones" and "bezoar stones." They serve a valuable purpose in paleontology because they provide direct evidence of the predation and diet of extinct organisms. Coprolites may range in size from a few millimetres to over 60 centimetres.

Transitional

A transitional fossil is any fossilized remains of a life form that exhibits traits common to both an ancestral group and its derived descendant group. This is especially important where the descendant group is sharply differentiated by gross anatomy and mode of living from the ancestral group. Because of the incompleteness of the fossil record, there is usually no way to know exactly how close a transitional fossil is to the point of divergence. These fossils serve as a reminder that taxonomic divisions are human constructs that have been imposed in hindsight on a continuum of variation.

Microfossils

Microfossils about 1 mm

Microfossil is a descriptive term applied to fossilized plants and animals whose size is just at or below the level at which the fossil can be analyzed by the naked eye. A commonly applied cutoff point between "micro" and "macro" fossils is 1 mm. Microfossils may either be complete (or near-complete) organisms in themselves (such as the marine plankters foraminifera and coccolithophores) or component parts (such as small teeth or spores) of larger animals or plants. Microfossils are of critical importance as a reservoir of paleoclimate information, and are also commonly used by biostratigraphers to assist in the correlation of rock units.

Resin

The wasp Leptofoenus pittfieldae trapped in Dominican amber, from 20 to 16 million years ago. It is known only from this specimen.

Fossil resin (colloquially called amber) is a natural polymer found in many types of strata throughout the world, even the Arctic. The oldest fossil resin dates to the Triassic, though most dates to the Cenozoic. The excretion of the resin by certain plants is thought to be an evolutionary adaptation for protection from insects and to seal wounds. Fossil resin often contains other fossils called inclusions that were captured by the sticky resin. These include bacteria, fungi, other plants, and animals. Animal inclusions are usually small invertebrates, predominantly arthropods such as insects and spiders, and only extremely rarely a vertebrate such as a small lizard. Preservation of inclusions can be exquisite, including small fragments of DNA.

Derived, or reworked

Eroded Jurassic plesiosaur vertebral centrum found in the Lower Cretaceous Faringdon Sponge Gravels in Faringdon, England. An example of a remanié fossil.

A derived, reworked or remanié fossil is a fossil found in rock that accumulated significantly later than when the fossilized animal or plant died. Reworked fossils are created by erosion exhuming (freeing) fossils from the rock formation in which they were originally deposited and their redeposition in a younger sedimentary deposit.

Wood

Petrified wood. The internal structure of the tree and bark are maintained in the permineralization process.
 
Polished section of petrified wood showing annual rings

Fossil wood is wood that is preserved in the fossil record. Wood is usually the part of a plant that is best preserved (and most easily found). Fossil wood may or may not be petrified. The fossil wood may be the only part of the plant that has been preserved: therefore such wood may get a special kind of botanical name. This will usually include "xylon" and a term indicating its presumed affinity, such as Araucarioxylon (wood of Araucaria or some related genus), Palmoxylon (wood of an indeterminate palm), or Castanoxylon (wood of an indeterminate chinkapin).

Subfossil

The term subfossil can be used to refer to remains, such as bones, nests, or defecations, whose fossilization process is not complete, either because the length of time since the animal involved was living is too short (less than 10,000 years) or because the conditions in which the remains were buried were not optimal for fossilization. Subfossils are often found in caves or other shelters where they can be preserved for thousands of years. The main importance of subfossil vs. fossil remains is that the former contain organic material, which can be used for radiocarbon dating or extraction and sequencing of DNA, protein, or other biomolecules. Additionally, isotope ratios can provide much information about the ecological conditions under which extinct animals lived. Subfossils are useful for studying the evolutionary history of an environment and can be important to studies in paleoclimatology.

Subfossils are often found in depositionary environments, such as lake sediments, oceanic sediments, and soils. Once deposited, physical and chemical weathering can alter the state of preservation.

Chemical fossils

Chemical fossils, or chemofossils, are chemicals found in rocks and fossil fuels (petroleum, coal, and natural gas) that provide an organic signature for ancient life. Molecular fossils and isotope ratios represent two types of chemical fossils. The oldest traces of life on Earth are fossils of this type, including carbon isotope anomalies found in zircons that imply the existence of life as early as 4.1 billion years ago.

Dating

Estimating dates

Paleontology seeks to map out how life evolved across geologic time. A substantial hurdle is the difficulty of working out fossil ages. Beds that preserve fossils typically lack the radioactive elements needed for radiometric dating. This technique is our only means of giving rocks greater than about 50 million years old an absolute age, and can be accurate to within 0.5% or better. Although radiometric dating requires careful laboratory work, its basic principle is simple: the rates at which various radioactive elements decay are known, and so the ratio of the radioactive element to its decay products shows how long ago the radioactive element was incorporated into the rock. Radioactive elements are common only in rocks with a volcanic origin, and so the only fossil-bearing rocks that can be dated radiometrically are volcanic ash layers, which may provide termini for the intervening sediments.

Stratigraphy

Consequently, palaeontologists rely on stratigraphy to date fossils. Stratigraphy is the science of deciphering the "layer-cake" that is the sedimentary record. Rocks normally form relatively horizontal layers, with each layer younger than the one underneath it. If a fossil is found between two layers whose ages are known, the fossil's age is claimed to lie between the two known ages. Because rock sequences are not continuous, but may be broken up by faults or periods of erosion, it is very difficult to match up rock beds that are not directly adjacent. However, fossils of species that survived for a relatively short time can be used to match isolated rocks: this technique is called biostratigraphy. For instance, the conodont Eoplacognathus pseudoplanus has a short range in the Middle Ordovician period. If rocks of unknown age have traces of E. pseudoplanus, they have a mid-Ordovician age. Such index fossils must be distinctive, be globally distributed and occupy a short time range to be useful. Misleading results are produced if the index fossils are incorrectly dated. Stratigraphy and biostratigraphy can in general provide only relative dating (A was before B), which is often sufficient for studying evolution. However, this is difficult for some time periods, because of the problems involved in matching rocks of the same age across continents. Family-tree relationships also help to narrow down the date when lineages first appeared. For instance, if fossils of B or C date to X million years ago and the calculated "family tree" says A was an ancestor of B and C, then A must have evolved earlier.

It is also possible to estimate how long ago two living clades diverged, in other words approximately how long ago their last common ancestor must have lived, by assuming that DNA mutations accumulate at a constant rate. These "molecular clocks", however, are fallible, and provide only approximate timing: for example, they are not sufficiently precise and reliable for estimating when the groups that feature in the Cambrian explosion first evolved, and estimates produced by different techniques may vary by a factor of two.

Limitations

Some of the most remarkable gaps in the fossil record (as of October 2013) show slanting toward organisms with hard parts.

Organisms are only rarely preserved as fossils in the best of circumstances, and only a fraction of such fossils have been discovered. This is illustrated by the fact that the number of species known through the fossil record is less than 5% of the number of known living species, suggesting that the number of species known through fossils must be far less than 1% of all the species that have ever lived. Because of the specialized and rare circumstances required for a biological structure to fossilize, only a small percentage of life-forms can be expected to be represented in discoveries, and each discovery represents only a snapshot of the process of evolution. The transition itself can only be illustrated and corroborated by transitional fossils, which will never demonstrate an exact half-way point.

The fossil record is strongly biased toward organisms with hard-parts, leaving most groups of soft-bodied organisms with little to no role. It is replete with the mollusks, the vertebrates, the echinoderms, the brachiopods and some groups of arthropods.

Sites

Lagerstätten

Fossil sites with exceptional preservation—sometimes including preserved soft tissues—are known as Lagerstätten—German for "storage places". These formations may have resulted from carcass burial in an anoxic environment with minimal bacteria, thus slowing decomposition. Lagerstätten span geological time from the Cambrian period to the present. Worldwide, some of the best examples of near-perfect fossilization are the Cambrian Maotianshan shales and Burgess Shale, the Devonian Hunsrück Slates, the Jurassic Solnhofen limestone, and the Carboniferous Mazon Creek localities.

Stromatolites

Lower Proterozoic stromatolites from Bolivia, South America

Stromatolites are layered accretionary structures formed in shallow water by the trapping, binding and cementation of sedimentary grains by biofilms of microorganisms, especially cyanobacteria. Stromatolites provide some of the most ancient fossil records of life on Earth, dating back more than 3.5 billion years ago.

Stromatolites were much more abundant in Precambrian times. While older, Archean fossil remains are presumed to be colonies of cyanobacteria, younger (that is, Proterozoic) fossils may be primordial forms of the eukaryote chlorophytes (that is, green algae). One genus of stromatolite very common in the geologic record is Collenia. The earliest stromatolite of confirmed microbial origin dates to 2.724 billion years ago.

A 2009 discovery provides strong evidence of microbial stromatolites extending as far back as 3.45 billion years ago.

Stromatolites are a major constituent of the fossil record for life's first 3.5 billion years, peaking about 1.25 billion years ago. They subsequently declined in abundance and diversity, which by the start of the Cambrian had fallen to 20% of their peak. The most widely supported explanation is that stromatolite builders fell victims to grazing creatures (the Cambrian substrate revolution), implying that sufficiently complex organisms were common over 1 billion years ago.

The connection between grazer and stromatolite abundance is well documented in the younger Ordovician evolutionary radiation; stromatolite abundance also increased after the end-Ordovician and end-Permian extinctions decimated marine animals, falling back to earlier levels as marine animals recovered. Fluctuations in metazoan population and diversity may not have been the only factor in the reduction in stromatolite abundance. Factors such as the chemistry of the environment may have been responsible for changes.

While prokaryotic cyanobacteria themselves reproduce asexually through cell division, they were instrumental in priming the environment for the evolutionary development of more complex eukaryotic organisms. Cyanobacteria (as well as extremophile Gammaproteobacteria) are thought to be largely responsible for increasing the amount of oxygen in the primeval earth's atmosphere through their continuing photosynthesis. Cyanobacteria use water, carbon dioxide and sunlight to create their food. A layer of mucus often forms over mats of cyanobacterial cells. In modern microbial mats, debris from the surrounding habitat can become trapped within the mucus, which can be cemented by the calcium carbonate to grow thin laminations of limestone. These laminations can accrete over time, resulting in the banded pattern common to stromatolites. The domal morphology of biological stromatolites is the result of the vertical growth necessary for the continued infiltration of sunlight to the organisms for photosynthesis. Layered spherical growth structures termed oncolites are similar to stromatolites and are also known from the fossil record. Thrombolites are poorly laminated or non-laminated clotted structures formed by cyanobacteria common in the fossil record and in modern sediments.

The Zebra River Canyon area of the Kubis platform in the deeply dissected Zaris Mountains of southwestern Namibia provides an extremely well exposed example of the thrombolite-stromatolite-metazoan reefs that developed during the Proterozoic period, the stromatolites here being better developed in updip locations under conditions of higher current velocities and greater sediment influx.

Astrobiology

It has been suggested that biominerals could be important indicators of extraterrestrial life and thus could play an important role in the search for past or present life on the planet Mars. Furthermore, organic components (biosignatures) that are often associated with biominerals are believed to play crucial roles in both pre-biotic and biotic reactions.

On 24 January 2014, NASA reported that current studies by the Curiosity and Opportunity rovers on Mars will now be searching for evidence of ancient life, including a biosphere based on autotrophic, chemotrophic and/or chemolithoautotrophic microorganisms, as well as ancient water, including fluvio-lacustrine environments (plains related to ancient rivers or lakes) that may have been habitable. The search for evidence of habitability, taphonomy (related to fossils), and organic carbon on the planet Mars is now a primary NASA objective.

Pseudofossils

An example of a pseudofossil: Manganese dendrites on a limestone bedding plane from Solnhofen, Germany; scale in mm

Pseudofossils are visual patterns in rocks that are produced by geologic processes rather than biologic processes. They can easily be mistaken for real fossils. Some pseudofossils, such as geological dendrite crystals, are formed by naturally occurring fissures in the rock that get filled up by percolating minerals. Other types of pseudofossils are kidney ore (round shapes in iron ore) and moss agates, which look like moss or plant leaves. Concretions, spherical or ovoid-shaped nodules found in some sedimentary strata, were once thought to be dinosaur eggs, and are often mistaken for fossils as well.

History of the study of fossils

Gathering fossils dates at least to the beginning of recorded history. The fossils themselves are referred to as the fossil record. The fossil record was one of the early sources of data underlying the study of evolution and continues to be relevant to the history of life on Earth. Paleontologists examine the fossil record to understand the process of evolution and the way particular species have evolved.

Ancient civilizations

Fossils have been visible and common throughout most of natural history, and so documented human interaction with them goes back as far as recorded history, or earlier.

There are many examples of paleolithic stone knives in Europe, with fossil echinoderms set precisely at the hand grip, going all the way back to Homo heidelbergensis and neanderthals. These ancient peoples also drilled holes through the center of those round fossil shells, apparently using them as beads for necklaces.

The ancient Egyptians gathered fossils of species that resembled the bones of modern species they worshipped. The god Set was associated with the hippopotamus, therefore fossilized bones of hippo-like species were kept in that deity's temples. Five-rayed fossil sea urchin shells were associated with the deity Sopdu, the Morning Star, equivalent of Venus in Roman mythology.

Ceratopsian skulls are common in the Dzungarian Gate mountain pass in Asia, an area once famous for gold mines, as well as its endlessly cold winds. This has been attributed to legends of both gryphons and the land of Hyperborea

Fossils appear to have directly contributed to the mythology of many civilizations, including the ancient Greeks. Classical Greek historian Herodotos wrote of an area near Hyperborea where gryphons protected golden treasure. There was indeed gold mining in that approximate region, where beaked Protoceratops skulls were common as fossils.

A later Greek scholar, Aristotle, eventually realized that fossil seashells from rocks were similar to those found on the beach, indicating the fossils were once living animals. He had previously explained them in terms of vaporous exhalations, which Persian polymath Avicenna modified into the theory of petrifying fluids (succus lapidificatus). Recognition of fossil seashells as originating in the sea was built upon in the 14th century by Albert of Saxony, and accepted in some form by most naturalists by the 16th century.

Roman naturalist Pliny the Elder wrote of "tongue stones", which he called glossopetra. These were fossil shark teeth, thought by some classical cultures to look like the tongues of people or snakes. He also wrote about the horns of Ammon, which are fossil ammonites, from whence the group of shelled octopus-cousins ultimately draws its modern name. Pliny also makes one of the earlier known references to toadstones, thought until the 18th century to be a magical cure for poison originating in the heads of toads, but which are fossil teeth from Lepidotes, a Cretaceous ray-finned fish.

The Plains tribes of North America are thought to have similarly associated fossils, such as the many intact pterosaur fossils naturally exposed in the region, with their own mythology of the thunderbird.

There is no such direct mythological connection known from prehistoric Africa, but there is considerable evidence of tribes there excavating and moving fossils to ceremonial sites, apparently treating them with some reverence.

In Japan, fossil shark teeth were associated with the mythical tengu, thought to be the razor-sharp claws of the creature, documented some time after the 8th century AD.

In medieval China, the fossil bones of ancient mammals including Homo erectus were often mistaken for "dragon bones" and used as medicine and aphrodisiacs. In addition, some of these fossil bones are collected as "art" by scholars, who left scripts on various artifacts, indicating the time they were added to a collection. One good example is the famous scholar Huang Tingjian of the South Song Dynasty during the 11th century, who kept a specific seashell fossil with his own poem engraved on it. In the West fossilized sea creatures on mountainsides were seen as proof of the biblical deluge.

In 1027, the Persian Avicenna explained fossils' stoniness in The Book of Healing:

If what is said concerning the petrifaction of animals and plants is true, the cause of this (phenomenon) is a powerful mineralizing and petrifying virtue which arises in certain stony spots, or emanates suddenly from the earth during earthquake and subsidences, and petrifies whatever comes into contact with it. As a matter of fact, the petrifaction of the bodies of plants and animals is not more extraordinary than the transformation of waters.

From the 13th century to the present day, scholars pointed out that the fossil skulls of Deinotherium giganteum, found in Crete and Greece, might have been interpreted as being the skulls of the Cyclopes of Greek mythology, and are possibly the origin of that Greek myth. Their skulls appear to have a single eye-hole in the front, just like their modern elephant cousins, though in fact it's actually the opening for their trunk.

Fossil shells from the cretaceous era sea urchin, Micraster, were used in medieval times as both shepherd's crowns to protect houses, and as painted fairy loaves by bakers to bring luck to their bread-making.

In Norse mythology, echinoderm shells (the round five-part button left over from a sea urchin) were associated with the god Thor, not only being incorporated in thunderstones, representations of Thor's hammer and subsequent hammer-shaped crosses as Christianity was adopted, but also kept in houses to garner Thor's protection.

These grew into the shepherd's crowns of English folklore, used for decoration and as good luck charms, placed by the doorway of homes and churches. In Suffolk, a different species was used as a good-luck charm by bakers, who referred to them as fairy loaves, associating them with the similarly shaped loaves of bread they baked.

Early modern explanations

More scientific views of fossils emerged during the Renaissance. Leonardo da Vinci concurred with Aristotle's view that fossils were the remains of ancient life. For example, da Vinci noticed discrepancies with the biblical flood narrative as an explanation for fossil origins:

If the Deluge had carried the shells for distances of three and four hundred miles from the sea it would have carried them mixed with various other natural objects all heaped up together; but even at such distances from the sea we see the oysters all together and also the shellfish and the cuttlefish and all the other shells which congregate together, found all together dead; and the solitary shells are found apart from one another as we see them every day on the sea-shores.

And we find oysters together in very large families, among which some may be seen with their shells still joined together, indicating that they were left there by the sea and that they were still living when the strait of Gibraltar was cut through. In the mountains of Parma and Piacenza multitudes of shells and corals with holes may be seen still sticking to the rocks...."

Ichthyosaurus and Plesiosaurus from the 1834 Czech edition of Cuvier's Discours sur les revolutions de la surface du globe

In 1666, Nicholas Steno examined a shark, and made the association of its teeth with the "tongue stones" of ancient Greco-Roman mythology, concluding that those were not in fact the tongues of venomous snakes, but the teeth of some long-extinct species of shark.

Robert Hooke (1635-1703) included micrographs of fossils in his Micrographia and was among the first to observe fossil forams. His observations on fossils, which he stated to be the petrified remains of creatures some of which no longer existed, were published posthumously in 1705.

William Smith (1769–1839), an English canal engineer, observed that rocks of different ages (based on the law of superposition) preserved different assemblages of fossils, and that these assemblages succeeded one another in a regular and determinable order. He observed that rocks from distant locations could be correlated based on the fossils they contained. He termed this the principle of faunal succession. This principle became one of Darwin's chief pieces of evidence that biological evolution was real.

Georges Cuvier came to believe that most if not all the animal fossils he examined were remains of extinct species. This led Cuvier to become an active proponent of the geological school of thought called catastrophism. Near the end of his 1796 paper on living and fossil elephants he said:

All of these facts, consistent among themselves, and not opposed by any report, seem to me to prove the existence of a world previous to ours, destroyed by some kind of catastrophe.

Interest in fossils, and geology more generally, expanded during the early nineteenth century. In Britain, Mary Anning's discoveries of fossils, including the first complete ichthyosaur and a complete plesiosaurus skeleton, sparked both public and scholarly interest.

Linnaeus and Darwin

Early naturalists well understood the similarities and differences of living species leading Linnaeus to develop a hierarchical classification system still in use today. Darwin and his contemporaries first linked the hierarchical structure of the tree of life with the then very sparse fossil record. Darwin eloquently described a process of descent with modification, or evolution, whereby organisms either adapt to natural and changing environmental pressures, or they perish.

When Darwin wrote On the Origin of Species by Means of Natural Selection, or the Preservation of Favoured Races in the Struggle for Life, the oldest animal fossils were those from the Cambrian Period, now known to be about 540 million years old. He worried about the absence of older fossils because of the implications on the validity of his theories, but he expressed hope that such fossils would be found, noting that: "only a small portion of the world is known with accuracy." Darwin also pondered the sudden appearance of many groups (i.e. phyla) in the oldest known Cambrian fossiliferous strata.

After Darwin

Since Darwin's time, the fossil record has been extended to between 2.3 and 3.5 billion years. Most of these Precambrian fossils are microscopic bacteria or microfossils. However, macroscopic fossils are now known from the late Proterozoic. The Ediacara biota (also called Vendian biota) dating from 575 million years ago collectively constitutes a richly diverse assembly of early multicellular eukaryotes.

The fossil record and faunal succession form the basis of the science of biostratigraphy or determining the age of rocks based on embedded fossils. For the first 150 years of geology, biostratigraphy and superposition were the only means for determining the relative age of rocks. The geologic time scale was developed based on the relative ages of rock strata as determined by the early paleontologists and stratigraphers.

Since the early years of the twentieth century, absolute dating methods, such as radiometric dating (including potassium/argon, argon/argon, uranium series, and, for very recent fossils, radiocarbon dating) have been used to verify the relative ages obtained by fossils and to provide absolute ages for many fossils. Radiometric dating has shown that the earliest known stromatolites are over 3.4 billion years old.

Modern era

The fossil record is life's evolutionary epic that unfolded over four billion years as environmental conditions and genetic potential interacted in accordance with natural selection.

The Virtual Fossil Museum

Paleontology has joined with evolutionary biology to share the interdisciplinary task of outlining the tree of life, which inevitably leads backwards in time to Precambrian microscopic life when cell structure and functions evolved. Earth's deep time in the Proterozoic and deeper still in the Archean is only "recounted by microscopic fossils and subtle chemical signals." Molecular biologists, using phylogenetics, can compare protein amino acid or nucleotide sequence homology (i.e., similarity) to evaluate taxonomy and evolutionary distances among organisms, with limited statistical confidence. The study of fossils, on the other hand, can more specifically pinpoint when and in what organism a mutation first appeared. Phylogenetics and paleontology work together in the clarification of science's still dim view of the appearance of life and its evolution.

Phacopid trilobite Eldredgeops rana crassituberculata. The genus is named after Niles Eldredge.
 
Crinoid columnals (Isocrinus nicoleti) from the Middle Jurassic Carmel Formation at Mount Carmel Junction, Utah

Niles Eldredge's study of the Phacops trilobite genus supported the hypothesis that modifications to the arrangement of the trilobite's eye lenses proceeded by fits and starts over millions of years during the Devonian. Eldredge's interpretation of the Phacops fossil record was that the aftermaths of the lens changes, but not the rapidly occurring evolutionary process, were fossilized. This and other data led Stephen Jay Gould and Niles Eldredge to publish their seminal paper on punctuated equilibrium in 1971.

Synchrotron X-ray tomographic analysis of early Cambrian bilaterian embryonic microfossils yielded new insights of metazoan evolution at its earliest stages. The tomography technique provides previously unattainable three-dimensional resolution at the limits of fossilization. Fossils of two enigmatic bilaterians, the worm-like Markuelia and a putative, primitive protostome, Pseudooides, provide a peek at germ layer embryonic development. These 543-million-year-old embryos support the emergence of some aspects of arthropod development earlier than previously thought in the late Proterozoic. The preserved embryos from China and Siberia underwent rapid diagenetic phosphatization resulting in exquisite preservation, including cell structures. This research is a notable example of how knowledge encoded by the fossil record continues to contribute otherwise unattainable information on the emergence and development of life on Earth. For example, the research suggests Markuelia has closest affinity to priapulid worms, and is adjacent to the evolutionary branching of Priapulida, Nematoda and Arthropoda.

Trading and collecting

Fossil trading is the practice of buying and selling fossils. This is many times done illegally with artifacts stolen from research sites, costing many important scientific specimens each year. The problem is quite pronounced in China, where many specimens have been stolen.

Fossil collecting (sometimes, in a non-scientific sense, fossil hunting) is the collection of fossils for scientific study, hobby, or profit. Fossil collecting, as practiced by amateurs, is the predecessor of modern paleontology and many still collect fossils and study fossils as amateurs. Professionals and amateurs alike collect fossils for their scientific value.

Fossils as medicine

These is some medicinal and preventive use for some fossils. Largely the use of fossils as medicine is a matter of placebo effect. However, the consumption of certain fossils has been proven to help against stomach acidity and mineral depletion. The use of fossils to address health issues is rooted in traditional medicine and include the use of fossils as talismans. The specific fossil to use to alleviate or cure an illness is often based on its resemblance of the fossils and the symptoms or affected organ. The use dinosaur bones as "dragon bones" has persisted in Traditional Chinese medicine into modern times, with Mid Cretaceous dinosaur bones being used for the purpose in Ruyang County during the early 21st century.

Friday, April 30, 2021

Habitat fragmentation

From Wikipedia, the free encyclopedia
 
Fragmentation and destruction of Great Ape habitat in Central Africa, from the GLOBIO and GRASP projects (2002). Areas shown in black and red delineate areas of severe and moderate habitat loss, respectively.

Habitat fragmentation describes the emergence of discontinuities (fragmentation) in an organism's preferred environment (habitat), causing population fragmentation and ecosystem decay. Causes of habitat fragmentation include geological processes that slowly alter the layout of the physical environment (suspected of being one of the major causes of speciation), and human activity such as land conversion, which can alter the environment much faster and causes the extinction of many species. More specifically, habitat fragmentation is a process by which large and contiguous habitats get divided into smaller, isolated patches of habitats.

Deforestation and increased road-building in the Amazon Rainforest are a significant concern because of increased human encroachment upon wild areas, increased resource-extraction and further threats to biodiversity.

Definition

The term habitat fragmentation includes five discrete phenomena:

  • Reduction in the total area of the habitat
  • Decrease of the interior: edge ratio
  • Isolation of one habitat fragment from other areas of habitat
  • Breaking up of one patch of habitat into several smaller patches
  • Decrease in the average size of each patch of habitat

"fragmentation ... not only causes loss of the amount of habitat but by creating small, isolated patches it also changes the properties of the remaining habitat" (van den Berg et al. 2001). Habitat fragmentation is the landscape level of the phenomenon, and patch level process. Thus meaning, it covers; the patch areas, edge effects, and patch shape complexity.

In scientific literature, there is some debate whether the term "habitat fragmentation" applies in cases of habitat loss, or whether the term primarily applies to the phenomenon of habitat being cut into smaller pieces without significant reduction in habitat area. Scientists who use the stricter definition of "habitat fragmentation" per se would refer to the loss of habitat area as "habitat loss" and explicitly mention both terms if describing a situation where the habitat becomes less connected and there is less overall habitat.

Furthermore, habitat fragmentation is considered as an invasive threat to biodiversity, due to its implications of affecting large number of species than biological invasions, overexploitation, or pollution.

Additionally, the effects of habitat fragmentation damage the ability for species, such as native plants, to be able to effectively adapt to their changing environments. Ultimately, this prevents gene flow from one generation of population to the next, especially for species living in smaller population sizes. Whereas, for species of larger populations have more genetic mutations which can arise and genetic recombination impacts which can increase species survival in those environments. Overall, habitat fragmentation results in habitat disintegration and habitat loss which both tie into destructing biodiversity as a whole.

Causes

Natural causes

Evidence of habitat destruction through natural processes such as volcanism, fire, and climate change is found in the fossil record. For example, habitat fragmentation of tropical rainforests in Euramerica 300 million years ago led to a great loss of amphibian diversity, but simultaneously the drier climate spurred on a burst of diversity among reptiles.

Human causes

Habitat fragmentation is frequently caused by humans when native plants are cleared for human activities such as agriculture, rural development, urbanization and the creation of hydroelectric reservoirs. Habitats which were once continuous become divided into separate fragments. After intensive clearing, the separate fragments tend to be very small islands isolated from each other by cropland, pasture, pavement, or even barren land. The latter is often the result of slash and burn farming in tropical forests. In the wheat belt of central-western New South Wales, Australia, 90% of the native vegetation has been cleared and over 99% of the tall grass prairie of North America has been cleared, resulting in extreme habitat fragmentation.

Endogenous vs. exogenous

There are two types of processes that can lead to habitat fragmentation. There are exogenous processes and endogenous processes. Endogenous is a process that develops as a part of species biology so they typically include changes in biology, behavior, and interactions within or between species. Endogenous threats can result in changes to breeding patterns or migration patterns and are often triggered by exogenous processes. Exogenous processes are independent of species biology and can include habitat degradation, habitat subdivision or habitat isolation. These processes can have a substantial impact on endogenous processes by fundamentally altering species behavior. Habitat subdivision or isolation can lead to changes in dispersal or movement of species including changes to seasonal migration. These changes can lead to a decrease in a density of species, increased competition or even increased predation.

Implications

Habitat and biodiversity loss

One of the major ways that habitat fragmentation affects biodiversity is by reducing the amount of suitable habitat available for organisms. Habitat fragmentation often involves both habitat destruction and the subdivision of previously continuous habitat. Plants and other sessile organisms are disproportionately affected by some types of habitat fragmentation because they cannot respond quickly to the altered spatial configuration of the habitat.

Habitat loss, which can occur through the process of habitat fragmentation, is considered to be the greatest threat to species. But, the effect of the configuration of habitat patches within the landscape, independent of the effect of the amount of habitat within the landscape (referred to as fragmentation per se), has been suggested to be small. A review of empirical studies found that, of the 381 reported significant effect of habitat fragmentation per se on species occurrences, abundances or diversity in the scientific literature, 76% were positive whereas 24% were negative. Despite these results, the scientific literature tends to emphasize negative effects more than positive effects. Positive effects of habitat fragmentation per se imply that several small patches of habitat can have higher conservation value than a single large patch of equivalent size. Land sharing strategies could therefore have more positive impacts on species than land sparing strategies.

Habitat fragmented by numerous roads near the Indiana Dunes National Park.

Area is the primary determinant of the number of species in a fragment and the relative contributions of demographic and genetic processes to the risk of global population extinction depend on habitat configuration, stochastic environmental variation and species features. Minor fluctuations in climate, resources, or other factors that would be unremarkable and quickly corrected in large populations can be catastrophic in small, isolated populations. Thus fragmentation of habitat is an important cause of species extinction. Population dynamics of subdivided populations tend to vary asynchronously. In an unfragmented landscape a declining population can be "rescued" by immigration from a nearby expanding population. In fragmented landscapes, the distance between fragments may prevent this from happening. Additionally, unoccupied fragments of habitat that are separated from a source of immigrants by some barrier are less likely to be repopulated than adjoining fragments. Even small species such as the Columbia spotted frog are reliant on the rescue effect. Studies showed 25% of juveniles travel a distance over 200m compared to 4% of adults. Of these, 95% remain in their new locale, demonstrating that this journey is necessary for survival.

Additionally, habitat fragmentation leads to edge effects. Microclimatic changes in light, temperature, and wind can alter the ecology around the fragment, and in the interior and exterior portions of the fragment. Fires become more likely in the area as humidity drops and temperature and wind levels rise. Exotic and pest species may establish themselves easily in such disturbed environments, and the proximity of domestic animals often upsets the natural ecology. Also, habitat along the edge of a fragment has a different climate and favours different species from the interior habitat. Small fragments are therefore unfavourable for species that require interior habitat. The percentage preservation of contiguous habitats is closely related to both genetic and species biodiversity preservation. Generally a 10% remnant contiguous habitat will result in a 50% biodiversity loss.

Much of the remaining terrestrial wildlife habitat in many third world countries has experienced fragmentation through the development of urban expansion such as roads interfering with habitat loss. Aquatic species’ habitats have been fragmented by dams and water diversions. These fragments of habitat may not be large or connected enough to support species that need a large territory where they can find mates and food. The loss and fragmentation of habitats makes it difficult for migratory species to find places to rest and feed along their migration routes.

Informed conservation

Habitat fragmentation is often a cause of species becoming threatened or endangered. The existence of viable habitat is critical to the survival of any species, and in many cases, the fragmentation of any remaining habitat can lead to difficult decisions for conservation biologists. Given a limited amount of resources available for conservation is it preferable to protect the existing isolated patches of habitat or to buy back land to get the largest possible contiguous piece of land. In rare cases, a conservation reliant species may gain some measure of disease protection by being distributed in isolated habitats, and when controlled for overall habitat loss some studies have shown a positive relationship between species richness and fragmentation; this phenomenon has been called the habitat amount hypothesis, though the validity of this claim has been disputed. The ongoing debate of what size fragments are most relevant for conservation is often referred to as SLOSS (Single Large or Several Small).

One solution to the problem of habitat fragmentation is to link the fragments by preserving or planting corridors of native vegetation. In some cases, a bridge or underpass may be enough to join two fragments. This has the potential to mitigate the problem of isolation but not the loss of interior habitat.

Another mitigation measure is the enlargement of small remnants to increase the amount of interior habitat. This may be impractical since developed land is often more expensive and could require significant time and effort to restore.

The best solution is generally dependent on the particular species or ecosystem that is being considered. More mobile species, like most birds, do not need connected habitat while some smaller animals, like rodents, may be more exposed to predation in open land. These questions generally fall under the headings of metapopulations island biogeography.

Genetic risks

As the remaining habitat patches are smaller, they tend to support smaller populations of fewer species. Small populations are at an increased risk of a variety of genetic consequences that influence their long-term survival. Remnant populations often contain only a subset of the genetic diversity found in the previously continuous habitat. In these cases, processes that act upon underlying genetic diversity, such as adaptation, have a smaller pool of fitness-maintaining alleles to survive in the face of environmental change. However in some scenarios, where subsets of genetic diversity are partitioned among multiple habitat fragments, almost all original genetic diversity can be maintained despite each individual fragment displaying a reduced subset of diversity.

Gene Flow and Inbreeding

Gene flow occurs when individuals of the same species exchange genetic information through reproduction. Populations can maintain genetic diversity through migration. When a habitat becomes fragmented and reduced in area, gene flow and migration are typically reduced. Fewer individuals will migrate into the remaining fragments, and small disconnected populations that may have once been part of a single large population will become reproductively isolated. Scientific evidence that gene flow is reduced due to fragmentation depends on the study species. While trees that have long-range pollination and dispersal mechanisms may not experience reduced gene flow following fragmentation, most species are at risk of reduced gene flow following habitat fragmentation.

Reduced gene flow, and reproductive isolation can result in inbreeding between related individuals. Inbreeding does not always result in negative fitness consequences, but when inbreeding is associated with fitness reduction it is called inbreeding depression. Inbreeding becomes of increasing concern as the level of homozygosity increases, facilitating the expression of deleterious alleles that reduce the fitness. Habitat fragmentation can lead to inbreeding depression for many species due to reduced gene flow. Inbreeding depression is associated with conservation risks, like local extinction.

Genetic drift

Small populations are more susceptible to genetic drift. Genetic drift is random changes to the genetic makeup of populations and leads to reductions in genetic diversity. The smaller the population is, the more likely genetic drift will be a driving force of evolution rather than natural selection. Because genetic drift is a random process, it does not allow species to become more adapted to their environment. Habitat fragmentation is associated with increases to genetic drift in small populations which can have negative consequences for the genetic diversity of the populations. However, research suggests that some tree species may be resilient to the negative consequences of genetic drift until population size is as small as ten individuals or less.

Genetic consequences of habitat fragmentation for plant populations

Habitat fragmentation decreases the size and increases plant populations' spatial isolation. With genetic variation and increased methods of inter-population genetic divergence due to increased effects of random genetic drift, elevating inbreeding and reducing gene flow within plant species. While genetic variation may decrease with remnant population size, not all fragmentation events lead to genetic losses and different types of genetic variation. Rarely, fragmentation can also increase gene flow among remnant populations, breaking down local genetic structure.

Adaptation

In order for populations to evolve in response to natural selection, they must be large enough that natural selection is a stronger evolutionary force than genetic drift. Recent studies on the impacts of habitat fragmentation on adaptation in some plant species have suggested that organisms in fragmented landscapes may be able to adapt to fragmentation. However, there are also many cases where fragmentation reduces adaptation capacity because of small population size.

Examples of impacted species

Some species that have experienced genetic consequences due to habitat fragmentation are listed below:

Macquarie perch

Effect on animal behaviours

Although the way habitat fragmentation affects the genetics and extinction rates of species has been heavily studied, fragmentation has also been shown to affect species' behaviours and cultures as well. This is important because social interactions can determine and have an effect on a species' fitness and survival. Habitat fragmentation alters the resources available and the structure of habitats, as a result, alters the behaviours of species and the dynamics between differing species. Behaviours affected can be within a species such as reproduction, mating, foraging, species dispersal, communication and movement patterns or can be behaviours between species such as predator-prey relationships. In addition, when animals happen to venture into unknown areas in between fragmented forests or landscapes, they can supposedly come into contact with humans which puts them at a great risk and further decreases their chances of survival.

Predation behaviours

Habitat fragmentation due to anthropogenic activities has been shown to greatly affect the predator-prey dynamics of many species by altering the number of species and the members of those species. This affects the natural predator-prey relationships between animals in a given community and forces them to alter their behaviours and interactions, therefore resetting the so-called "behavioral space race". The way in which fragmentation changes and re-shapes these interactions can occur in many different forms. Most prey species have patches of land that are a refuge from their predators, allowing them the safety to reproduce and raise their young. Human introduced structures such as roads and pipelines alter these areas by facilitating predator activity in these refuges, increasing predator-prey overlap. The opposite could also occur in the favour of prey, increasing prey refuge and subsequently decreasing predation rates. Fragmentation may also increase predator abundance or predator efficiency and therefore increase predation rates in this manner. Several other factors can also increase or decrease the extent to which the shifting predator-prey dynamics affect certain species, including how diverse a predators diet is and how flexible habitat requirements are for predators and prey. Depending on which species are affected and these other factors, fragmentation and its effects on predator-prey dynamics may contribute to species extinction. In response to these new environmental pressures, new adaptive behaviours may be developed. Prey species may adapt to increased risk of predation with strategies such as altering mating tactics or changing behaviours and activities related to food and foraging.

Boreal woodland caribous

In the boreal woodland caribous of British Columbia, the effects of fragmentation are demonstrated. The species refuge area is peatland bog which has been interrupted by linear features such as roads and pipelines. These features have allowed their natural predators, the wolf, and the black bear to more efficiently travel over landscapes and between patches of land. Since their predators can more easily access the caribous' refuge, the females of the species attempt to avoid the area, affecting their reproductive behaviours and offspring produced.

Communication behaviours

Fragmentation affecting the communication behaviours of birds has been well studied in Dupont's Lark. The Larks primarily reside in regions of Spain and are a small passerine bird which uses songs as a means of cultural transmission between members of the species. The Larks have two distinct vocalizations, the song, and the territorial call. The territorial call is used by males to defend and signal territory from other male Larks and is shared between neighbouring territories when males respond to a rivals song. Occasionally it is used as a threat signal to signify an impending attack on territory. A large song repertoire can enhance a male's ability to survive and reproduce as he has a greater ability to defend his territory from other males, and a larger number of males in the species means a larger variety of songs being transmitted. Fragmentation of the Dupont's Lark territory from agriculture, forestry and urbanization appears to have a large effect on their communication structures. Males only perceive territories of a certain distance to be rivals and so isolation of territory from others due to fragmentation leads to a decrease in territorial calls as the males no longer have any reason to use it or have any songs to match.

Humans have also brought on varying implications into ecosystems which in turn affect animal behaviour and responses generated. Although there are some species which are able to survive these kinds of harsh conditions, such as, cutting down wood in the forests for pulp and paper industries, there are animals which can survive this change but some that cannot. An example includes, varying aquatic insects are able to identify appropriate ponds to lay their eggs with the aid of polarized light to guide them, however, due to ecosystem modifications caused by humans they are led onto artificial structures which emit artificial light which are induced by dry asphalt dry roads for an example.

Effect on microorganisms

While habitat fragmentation is often associated with its effects on large plant and animal populations and biodiversity, due to the interconnectedness of ecosystems there are also significant effects that it has on the microbiota of an environment. Increased fragmentation has been linked to reduced populations and diversity of fungi responsible for decomposition, as well as the insects they are host to. This has been linked to simplified food webs in highly fragmented areas compared to old growth forests. Furthermore, edge effects have been shown to result in significantly varied microenvironments compared to interior forest due to variations in light availability, presence of wind, changes in precipitation, and overall moisture content of leaf litter. These microenvironments are often not conducive to overall forest health as they enable generalist species to thrive at the expense of specialists that depend on specific environments.

Forest fragmentation

Forest fragmentation is a form of habitat fragmentation where forests are reduced (either naturally or man-made) to relatively small, isolated patches of forest known as forest fragments or forest remnants. The intervening matrix that separates the remaining woodland patches can be natural open areas, farmland, or developed areas. Following the principles of island biogeography, remnant woodlands act like islands of forest in a sea of pastures, fields, subdivisions, shopping malls, etc. These fragments will then begin to undergo the process of ecosystem decay.

Forest fragmentation also includes less subtle forms of discontinuities such as utility right-of-ways (ROWs). Utility ROWs are of ecological interest because they have become pervasive in many forest communities, spanning areas as large as 5 million acres in the United States. Utility ROWs include electricity transmission ROWs, gas pipeline and telecommunication ROWs. Electricity transmission ROWs are created to prevent vegetation interference with transmission lines. Some studies have shown that electricity transmission ROWs harbor more plant species than adjoining forest areas, due to alterations in the microclimate in and around the corridor. Discontinuities in forest areas associated with utility right-of-ways can serve as biodiversity havens for native bees and grassland species, as the right-of-ways are preserved in an early successional stage.

Forest fragmentation reduces food resources and habitat sources for animals thus splitting these species apart. Thus, making these animals become much more susceptible to effects of predation and making them less likely to perform interbreeding - lowering genetic diversity.

Implications

Forest fragmentation is one of the greatest threats to biodiversity in forests, especially in the tropics. The problem of habitat destruction that caused the fragmentation in the first place is compounded by:

  • the inability of individual forest fragments to support viable populations, especially of large vertebrates
  • the local extinction of species that do not have at least one fragment capable of supporting a viable population
  • edge effects that alter the conditions of the outer areas of the fragment, greatly reducing the amount of true forest interior habitat.

The effect of fragmentation on the flora and fauna of a forest patch depends on a) the size of the patch, and b) its degree of isolation. Isolation depends on the distance to the nearest similar patch, and the contrast with the surrounding areas. For example, if a cleared area is reforested or allowed to regenerate, the increasing structural diversity of the vegetation will lessen the isolation of the forest fragments. However, when formerly forested lands are converted permanently to pastures, agricultural fields, or human-inhabited developed areas, the remaining forest fragments, and the biota within them, are often highly isolated.

Forest patches that are smaller or more isolated will lose species faster than those that are larger or less isolated. A large number of small forest "islands" typically cannot support the same biodiversity that a single contiguous forest would hold, even if their combined area is much greater than the single forest. However, forest islands in rural landscapes greatly increase their biodiversity. In the Maulino forest of Chile fragmentation appear to not affect overall plant diversity much, and tree diversity is indeed higher in fragments than in large continuous forests.

McGill University in Montreal, Quebec, Canada released a university based newspaper statement stating that 70% of the world’s remaining forest stands within one kilometre of a forest edge putting biodiversity at an immense risk based on research conducted by international scientists.

Reduced fragment area, increased isolation, and increased edge initiate changes that percolate through all ecosystems. Habitat fragmentation is able to formulate persistent outcomes which can also become unexpected such as an abundance of some species and the pattern that long temporal scales are required to discern many strong system responses.

Sustainable forest management

The presence of forest fragments influences the supply of various ecosystems in adjacent agricultural fields (Mitchell et al. 2014). Mitchell et al (2014), researched on six varying ecosystem factors such as crop production, decomposition, pesticide regulation, carbon storage, soil fertility, and water quality regulation in soybean fields through separate distances by nearby forest fragments which all varied in isolation and size across an agricultural landscape in Quebec, Canada. Sustainable forest management can be achieved in several ways including by managing forests for ecosystem services (beyond simple provisioning), through government compensation schemes, and through effective regulation and legal frameworks. The only realistic method of conserving forests is to apply and practice sustainable forest management to risk further loss.

There is a high industrial demand for wood, pulp, paper, and other resources which the forest can provide with, thus businesses which will want more access to the cutting of forests to gain those resources. The rainforest alliance has efficiently been able to put into place an approach to sustainable forest management, and they established this in the late 1980s. Their conservation was deemed successful as it has saved over nearly half a billion acres of land around the world.

A few approaches and measures which can be taken in order to conserve forests are methods by which erosion can be minimized, waste is properly disposed, conserve native tree species to maintain genetic diversity, and setting aside forestland (provides habitat for critical wildlife species). Additionally, forest fires can also occur frequently and measures can also be taken to further prevent forest fires from occurring. For example, in Guatemala’s culturally and ecologically significant Petén region, researchers were able to find over a 20-year period, actively managed FSC-certified forests experienced substantially lower rates of deforestation than nearby protected areas, and forest fires only affected 0.1 percent of certified land area, compared to 10.4 percent of protected areas. However, it must be duly noted that short term decisions regarding forest sector employment and harvest practices can have long-term effects on biodiversity. Planted forests become increasingly important as they supply approximately a quarter of global industrial roundwood production and are predicted to account for 50% of global output within two decades (Brown, 1998; Jaakko Poyry, 1999). Although there have been many difficulties, the implementation of forest certification has been quite prominent in being able to raise effective awareness and disseminating knowledge on a holistic concept, embracing economic, environmental and social issues, worldwide. While also providing a tool for a range of other applications than assessment of sustainability, such as e.g. verifying carbon sinks.

Approaches to understanding habitat fragmentation

Two approaches are typically used to understand habitat fragmentation and its ecological impacts.

Species-oriented approach

The species-oriented approach focuses specifically on individual species and how they each respond to their environment and habitat changes with in it. This approach can be limited because it does only focus on individual species and does not allow for a broad view of the impacts of habitat fragmentation across species.

Pattern-oriented approach

The pattern-oriented approach is based on land cover and its patterning in correlation with species occurrences. One model of study for landscape patterning is the patch-matrix-corridor model developed by Richard Forman The pattern-oriented approach focuses on land cover defined by human means and activities. This model has stemmed from island biogeography and tries to infer causal relationships between the defined landscapes and the occurrence of species or groups of species within them. The approach has limitations in its collective assumptions across species or landscapes which may not account for variations amongst them.

Variegation Model

The other model is the variegation model. Variegated landscapes retain much of their natural vegetation but are intermixed with gradients of modified habitat This model of habitat fragmentation typically applies to landscapes that are modified by agriculture. In contrast to the fragmentation model that is denoted by isolated patches of habitat surrounded by unsuitable landscape environments, the variegation model applies to landscapes modified by agriculture where small patches of habitat remain near the remnant original habitat. In between these patches are a matrix of grassland that is often modified versions of the original habitat. These areas do not present as much of a barrier to native species.

 

Entropy (information theory)

From Wikipedia, the free encyclopedia https://en.wikipedia.org/wiki/Entropy_(information_theory) In info...